Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL450345.1-202ENST00000605741 3881 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CCDC188H7C350 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC188H7C350 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC188H7C350 SUGT1P2-201ENST00000379452 992 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC188H7C350 NANOGP4-201ENST00000427230 913 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC188H7C350 AC005297.1-201ENST00000444765 862 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC188H7C350 RN7SL168P-201ENST00000463821 279 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC188H7C350 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC188H7C350 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
CCDC188H7C350 RNU6-513P-201ENST00000516104 104 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC188H7C350 MRPS21P7-201ENST00000566937 238 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 MIR3936-201ENST00000584304 110 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC188H7C350 AC005229.3-201ENST00000603438 323 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 AC011626.1-201ENST00000604710 562 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 BX322635.1-201ENST00000605804 496 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 AC018695.5-201ENST00000605872 315 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 AC015660.5-201ENST00000623238 564 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC188H7C350 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC188H7C350 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC188H7C350 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC188H7C350 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CCDC188H7C350 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC188H7C350 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC188H7C350 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CCDC188H7C350 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC188H7C350 NEPNP-201ENST00000404786 1371 ntBASIC5.54□□□□□ -1.52
CCDC188H7C350 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.54□□□□□ -1.52
CCDC188H7C350 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC188H7C350 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CCDC188H7C350 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC188H7C350 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC188H7C350 AL022322.2-201ENST00000624072 20397 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC188H7C350 MIR375-201ENST00000362103 64 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 RNU6-670P-201ENST00000364312 104 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 RNA5SP105-201ENST00000391123 113 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 ST13P16-201ENST00000401760 781 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 SNORA11.3-201ENST00000408471 128 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 RN7SKP16-201ENST00000410180 299 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 MARK2P12-201ENST00000420129 585 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 AC013470.3-201ENST00000420252 1194 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 MTCO1P57-201ENST00000432182 261 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 CYCSP51-201ENST00000443545 318 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 TIMM8BP2-201ENST00000445940 251 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 MORF4L1P4-201ENST00000450245 976 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC188H7C350 STRADBP1-201ENST00000478954 1281 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC188H7C350 HMGB1P44-201ENST00000508597 572 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 RN7SKP70-201ENST00000516655 271 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 RNU6-362P-201ENST00000516736 90 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 SCARNA16.4-201ENST00000516956 187 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 AC127381.1-201ENST00000555979 939 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC188H7C350 MIR3154-201ENST00000577829 84 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC188H7C350 AC006363.1-201ENST00000603806 463 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 AC009597.2-201ENST00000604659 592 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 AC084036.1-201ENST00000609190 508 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
CCDC188H7C350 AC107308.1-201ENST00000615897 301 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 SNORA11.6-201ENST00000619030 128 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC188H7C350 AC104820.1-201ENST00000624183 307 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 OR51C1P-202ENST00000641159 1444 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC188H7C350 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC188H7C350 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC188H7C350 HSPA8P14-201ENST00000552265 1805 ntBASIC5.53□□□□□ -1.52
CCDC188H7C350 AC097063.1-201ENST00000426714 1797 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CCDC188H7C350 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCDC188H7C350 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC188H7C350 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC188H7C350 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC188H7C350 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC188H7C350 RNA5SP223-201ENST00000365174 120 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 RN7SKP187-201ENST00000365536 330 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 RNU6-1320P-201ENST00000390838 107 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 RNU6-1269P-201ENST00000391139 107 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 HMGB1P20-201ENST00000402555 677 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 AL133173.1-201ENST00000423458 397 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC188H7C350 MTCO1P45-201ENST00000431457 267 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC188H7C350 AMYP1-201ENST00000440059 1023 ntBASIC5.52□□□□□ -1.53
CCDC188H7C350 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC188H7C350 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC188H7C350 ACA64.1-201ENST00000459171 127 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms