Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 MED31-202ENST00000574128 619 ntTSL 3 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 MIR4312-201ENST00000579909 76 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SL475P-201ENST00000583379 298 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 MIR5682-201ENST00000584864 76 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AL589765.5-201ENST00000596133 515 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC017076.1-201ENST00000607613 578 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AL365181.4-201ENST00000609800 547 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 5S_rRNA.16-201ENST00000612928 119 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AL353608.4-201ENST00000624487 1188 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AL049555.1-201ENST00000562834 1933 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AC006206.1-201ENST00000544842 3387 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 PWAR1-201ENST00000624188 2414 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 AL359922.3-201ENST00000624779 1670 ntBASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CHKB-CPT1BH3BT56 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 XKRY2-202ENST00000623874 1581 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 XKRY-202ENST00000624960 1581 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 NEPNP-201ENST00000404786 1371 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 GNAS-202ENST00000306090 477 ntTSL 5 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 RNU1-20P-201ENST00000363314 162 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 RNA5SP485-201ENST00000365053 119 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC092634.1-201ENST00000366505 199 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 FARP1-202ENST00000376581 1021 ntTSL 2 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 SUGT1P2-201ENST00000379452 992 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SKP137-201ENST00000411074 307 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC093414.1-201ENST00000434712 514 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 SUMO2P1-206ENST00000445436 284 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AL359839.1-201ENST00000451975 1160 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AL645939.1-201ENST00000453429 797 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 GEMIN2P1-201ENST00000454246 752 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 RN7SL39P-201ENST00000462264 297 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC023245.1-201ENST00000468501 517 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC126615.1-201ENST00000470084 630 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC025271.1-201ENST00000485045 429 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 GM2AP2-201ENST00000491764 562 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 EIF4E2P2-201ENST00000492033 736 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 ATP6V1G1P6-201ENST00000504007 334 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC018645.1-201ENST00000505003 109 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC112184.1-201ENST00000505179 312 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC021106.1-201ENST00000509020 1058 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 HMGB1P42-201ENST00000532126 553 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 VDAC2P2-201ENST00000544463 901 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 DUX4L52-201ENST00000549363 777 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC010287.1-201ENST00000566916 357 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 HNRNPCP4-201ENST00000571636 900 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 MIR4311-201ENST00000580794 100 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC024085.1-201ENST00000604299 432 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 AC018695.5-201ENST00000605872 315 ntBASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC2.78□□□□□ -1.96
CHKB-CPT1BH3BT56 OR6R2P-201ENST00000609216 300 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms