Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AGGF1P9-201ENST00000561884 913 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 MIR3936-201ENST00000584304 110 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AC015982.1-201ENST00000608113 465 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 Z95327.3-201ENST00000610385 572 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 STX3-208ENST00000641815 3236 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 CASC19-221ENST00000641309 1382 ntBASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM49D1C9J1S8 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 AL731566.1-201ENST00000620490 1937 ntBASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 U3.3-201ENST00000362986 216 ntBASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 AC013442.1-201ENST00000397347 228 ntBASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 AL136455.1-201ENST00000441083 1240 ntBASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 RPS11P7-201ENST00000442125 465 ntBASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 AC064862.4-201ENST00000442180 334 ntBASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 RPL36AP39-201ENST00000445859 318 ntBASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 AC073073.1-201ENST00000493920 463 ntBASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 PSMA2P2-201ENST00000504319 686 ntBASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 SNORD46.2-201ENST00000516021 102 ntBASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 AC012400.1-201ENST00000518452 381 ntBASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 AC010245.2-201ENST00000606908 1167 ntBASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 AP005131.7-201ENST00000610087 611 ntBASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.13□□□□□ -1.59
TRIM49D1C9J1S8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 AC007996.1-201ENST00000620414 2821 ntBASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 TRGV5P-201ENST00000419915 354 ntBASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 AC093166.2-201ENST00000455969 1017 ntBASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 RPEP1-201ENST00000504507 658 ntBASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 AC090568.1-201ENST00000509499 856 ntBASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 NPM1P21-201ENST00000513394 762 ntBASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 RNU6-513P-201ENST00000516104 104 ntBASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 RNA5SP303-201ENST00000516192 130 ntBASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 RNU6-941P-201ENST00000516346 108 ntBASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 RN7SL435P-201ENST00000584418 282 ntBASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 OR55B1P-203ENST00000641518 2602 ntBASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM49D1C9J1S8 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM49D1C9J1S8 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms