Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 RNA5SP335-201ENST00000363817 110 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 NANOGP4-201ENST00000427230 913 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 GSTM5P1-201ENST00000434751 660 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 RPS18P6-201ENST00000476880 458 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC023424.1-201ENST00000496058 459 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 IMPA1P1-201ENST00000510718 842 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 ASNSP4-201ENST00000511103 447 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC068993.1-201ENST00000546724 589 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 LSM3P2-201ENST00000551246 273 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 RPSAP73-201ENST00000614820 330 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AP002505.2-201ENST00000623585 696 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC079298.1-201ENST00000625026 1619 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC097063.1-201ENST00000426714 1797 ntBASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.27□□□□□ -1.73
TCRBV4S1A1TA0A5B7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC109780.1-201ENST00000451768 1344 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC022417.1-201ENST00000624768 1303 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC007618.1-201ENST00000366455 732 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 SNORA67-201ENST00000384423 137 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 PCNPP4-201ENST00000414817 517 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 DSTNP5-201ENST00000427921 523 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 RPS27P18-201ENST00000431701 247 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 TCEA1P3-201ENST00000443005 880 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 RPL32P9-201ENST00000487963 407 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 COX6B1P2-201ENST00000489624 230 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 RPS12P31-201ENST00000491419 398 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC072052.1-201ENST00000496556 306 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 RPEP1-201ENST00000504507 658 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 ENPP7P11-201ENST00000505915 627 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 PGAM1P13-201ENST00000507497 754 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 EIF3KP3-201ENST00000514461 639 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC130364.2-201ENST00000528639 604 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 OR11H3P-201ENST00000554547 982 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 PRPF19P1-201ENST00000584766 898 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC008536.1-201ENST00000602872 669 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC244107.2-201ENST00000611773 76 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 MIR6730-201ENST00000622213 67 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC018445.2-201ENST00000622987 260 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC135068.5-201ENST00000624197 983 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 ZNF733P-202ENST00000444809 1573 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 AC068870.3-201ENST00000625077 2536 ntBASIC4.26□□□□□ -1.73
TCRBV4S1A1TA0A5B7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms