Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 COX6B1P5-201ENST00000509843 249 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AP001922.4-201ENST00000526967 290 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 OR5D15P-201ENST00000531671 942 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 OR7E128P-201ENST00000532736 1024 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 ADAM3B-201ENST00000569937 840 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AC105254.2-201ENST00000603636 436 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AC018690.1-201ENST00000608144 626 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AL445528.2-201ENST00000620582 470 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AC091905.4-201ENST00000623432 202 ntBASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SMIM28A0A1B0GU29 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AC007996.1-201ENST00000620414 2821 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 RNA5SP428-201ENST00000365129 132 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 RNA5SP223-201ENST00000365174 120 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 RNU6-316P-201ENST00000391027 107 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AC009238.2-201ENST00000431026 355 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 BX323845.1-201ENST00000432417 179 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 BX842559.2-201ENST00000451418 605 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 RPL35AP28-201ENST00000459730 331 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 RN7SL443P-201ENST00000464331 290 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AC090142.2-201ENST00000483263 416 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 RN7SL290P-201ENST00000578661 300 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 BNIP3P35-201ENST00000604530 490 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AC016252.1-201ENST00000609721 474 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 Mico1.1-201ENST00000611698 204 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AL353662.3-201ENST00000625131 237 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 AL449283.1-201ENST00000602631 3403 ntBASIC5.51□□□□□ -1.53
SMIM28A0A1B0GU29 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 RN7SKP113-201ENST00000363891 295 ntBASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AL353625.1-202ENST00000366273 571 ntBASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 GPS2P1-201ENST00000411761 986 ntBASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 RBMY2KP-201ENST00000418221 992 ntBASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 SUMO2P1-206ENST00000445436 284 ntBASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 RNA5SP43-201ENST00000516559 110 ntBASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AC005000.1-201ENST00000536192 288 ntBASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AC008033.2-201ENST00000542626 177 ntBASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.5□□□□□ -1.53
SMIM28A0A1B0GU29 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms