Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 TTC41P-205ENST00000551270 3963 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AC114774.1-201ENST00000507410 1770 ntBASIC5.6□□□□□ -1.51
YIPF1Q9Y548 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
YIPF1Q9Y548 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AL109941.1-201ENST00000401925 229 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AL133270.1-201ENST00000402635 279 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC093162.1-201ENST00000419682 124 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 RPL12P43-201ENST00000420608 499 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 VN1R54P-201ENST00000435210 1049 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 H3F3BP1-201ENST00000440551 403 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC073465.2-201ENST00000440938 498 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 RPS23P9-201ENST00000448848 438 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 C1DP3-201ENST00000455013 423 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 RPL35AP28-201ENST00000459730 331 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC128716.1-201ENST00000475129 166 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 RN7SKP66-201ENST00000516681 231 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC026688.1-201ENST00000520639 1168 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 OR4A6P-201ENST00000534364 970 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 MIR4436B2-201ENST00000581415 91 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 MIR4436B1-201ENST00000583272 91 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC005252.1-201ENST00000604518 1063 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 AC104307.1-201ENST00000616142 196 ntBASIC5.59□□□□□ -1.51
YIPF1Q9Y548 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
YIPF1Q9Y548 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.59□□□□□ -1.52
YIPF1Q9Y548 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.59□□□□□ -1.52
YIPF1Q9Y548 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.59□□□□□ -1.52
YIPF1Q9Y548 AC015799.1-201ENST00000622996 3122 ntBASIC5.59□□□□□ -1.52
YIPF1Q9Y548 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 AC079097.1-201ENST00000512187 1399 ntBASIC5.58□□□□□ -1.52
YIPF1Q9Y548 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 RNU4-4P-201ENST00000364588 130 ntBASIC5.58□□□□□ -1.52
YIPF1Q9Y548 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.58□□□□□ -1.52
YIPF1Q9Y548 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 NDUFA5P1-201ENST00000433858 341 ntBASIC5.58□□□□□ -1.52
YIPF1Q9Y548 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 NDUFB5P1-201ENST00000508134 564 ntBASIC5.58□□□□□ -1.52
YIPF1Q9Y548 GTF2F2P1-201ENST00000511083 675 ntBASIC5.58□□□□□ -1.52
YIPF1Q9Y548 AC091912.1-201ENST00000511351 248 ntBASIC5.58□□□□□ -1.52
YIPF1Q9Y548 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 AC134349.2-201ENST00000535136 910 ntBASIC5.58□□□□□ -1.52
YIPF1Q9Y548 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.58□□□□□ -1.52
YIPF1Q9Y548 AL359715.3-201ENST00000569267 2123 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms