Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 AC004074.1-201ENST00000421810 1063 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 SLC25A18P1-201ENST00000449385 454 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 AC010733.1-201ENST00000451515 401 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 AL691482.1-201ENST00000453255 87 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 RN7SL205P-201ENST00000490174 284 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 AC134698.5-201ENST00000519444 336 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 AC022360.1-201ENST00000521058 340 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 OR5AN2P-201ENST00000534535 896 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 RN7SL52P-201ENST00000584271 284 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 RN7SL722P-201ENST00000617780 284 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 RN7SL565P-201ENST00000618246 284 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 AC073869.10-201ENST00000642016 354 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 NLRP3P1-201ENST00000622303 1785 ntBASIC6.53□□□□□ -1.36
SCN11AQ9UI33 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SCN11AQ9UI33 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.36
SCN11AQ9UI33 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
SCN11AQ9UI33 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
SCN11AQ9UI33 SAMMSON-226ENST00000642089 1582 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 SNORA70.6-201ENST00000383934 134 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AL035079.1-201ENST00000405210 287 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 TXNP5-201ENST00000441043 315 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 SCARNA22-201ENST00000503991 125 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AC021193.1-201ENST00000511607 420 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 IGKV1-32-201ENST00000519290 311 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AC020910.3-201ENST00000603701 874 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AC069213.2-201ENST00000420238 366 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 MTND2P40-201ENST00000436718 841 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 OR52J1P-201ENST00000450596 932 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 RN7SL385P-201ENST00000468873 276 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AC020937.1-201ENST00000519677 1013 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AC093388.1-201ENST00000609166 430 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 AC083809.1-201ENST00000615051 472 ntBASIC6.52□□□□□ -1.37
SCN11AQ9UI33 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
SCN11AQ9UI33 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 AC012213.2-201ENST00000562917 4597 ntBASIC6.51□□□□□ -1.37
SCN11AQ9UI33 AL590240.1-201ENST00000334118 313 ntBASIC6.51□□□□□ -1.37
SCN11AQ9UI33 RNA5SP223-201ENST00000365174 120 ntBASIC6.51□□□□□ -1.37
SCN11AQ9UI33 AC068538.1-201ENST00000376856 336 ntBASIC6.51□□□□□ -1.37
SCN11AQ9UI33 OR51B3P-201ENST00000412287 913 ntBASIC6.51□□□□□ -1.37
SCN11AQ9UI33 HYALP1-201ENST00000417674 1279 ntBASIC6.51□□□□□ -1.37
SCN11AQ9UI33 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 AC138761.5-201ENST00000433967 325 ntBASIC6.51□□□□□ -1.37
SCN11AQ9UI33 CYCSP11-201ENST00000436426 315 ntBASIC6.51□□□□□ -1.37
SCN11AQ9UI33 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.51□□□□□ -1.37
SCN11AQ9UI33 AURKAPS2-201ENST00000454983 333 ntBASIC6.51□□□□□ -1.37
SCN11AQ9UI33 RN7SL189P-201ENST00000468631 289 ntBASIC6.51□□□□□ -1.37
SCN11AQ9UI33 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms