Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.2□□□□□ -1.58
CHD7Q9P2D1 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 AL136116.2-201ENST00000404020 785 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 RNU2-30P-201ENST00000516209 141 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 AL442639.1-201ENST00000625030 1899 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 AC108463.1-201ENST00000450258 347 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 AC083899.1-201ENST00000454465 3819 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 AC011626.1-201ENST00000604710 562 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 MIR589-201ENST00000385238 99 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 RNA5SP345-201ENST00000410646 108 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 AC097523.2-201ENST00000435551 652 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 CYCSP34-201ENST00000458172 304 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 MED28P5-201ENST00000528254 438 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CHD7Q9P2D1 AC067931.1-201ENST00000624190 671 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 AC112200.1-201ENST00000625015 234 ntBASIC5.19□□□□□ -1.58
CHD7Q9P2D1 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 U3.10-201ENST00000364459 214 ntBASIC5.18□□□□□ -1.58
CHD7Q9P2D1 RPL6P5-201ENST00000445678 828 ntBASIC5.18□□□□□ -1.58
CHD7Q9P2D1 AL358232.1-201ENST00000448030 501 ntBASIC5.18□□□□□ -1.58
CHD7Q9P2D1 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 AL049839.1-201ENST00000556151 657 ntBASIC5.18□□□□□ -1.58
CHD7Q9P2D1 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 AP005432.1-201ENST00000580891 3485 ntBASIC5.18□□□□□ -1.58
CHD7Q9P2D1 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 MIR3158-1-201ENST00000583596 81 ntBASIC5.18□□□□□ -1.58
CHD7Q9P2D1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.18□□□□□ -1.58
CHD7Q9P2D1 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 OR8B9P-202ENST00000642028 5216 ntBASIC5.18□□□□□ -1.58
CHD7Q9P2D1 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CHD7Q9P2D1 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 Z95327.1-201ENST00000446082 482 ntBASIC5.17□□□□□ -1.58
CHD7Q9P2D1 RPS24P16-201ENST00000497294 392 ntBASIC5.17□□□□□ -1.58
CHD7Q9P2D1 AL683813.2-201ENST00000605245 502 ntBASIC5.17□□□□□ -1.58
CHD7Q9P2D1 AC090948.2-201ENST00000607363 564 ntBASIC5.17□□□□□ -1.58
CHD7Q9P2D1 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 CAST-222ENST00000508579 1758 ntTSL 2 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CHD7Q9P2D1 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms