Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC009120.7-201ENST00000623452 780 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AC012005.2-201ENST00000624333 397 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 AL354854.1-201ENST00000455940 1363 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 NSRP1P1-201ENST00000444067 1693 ntBASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCM2LQ9NUG4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCM2LQ9NUG4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCM2LQ9NUG4 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC022164.1-201ENST00000568767 2673 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCM2LQ9NUG4 TMSB4XP2-201ENST00000335179 210 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCM2LQ9NUG4 UBBP1-201ENST00000392399 473 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCM2LQ9NUG4 RPL12P16-201ENST00000431098 498 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AL161722.1-201ENST00000446972 1032 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 NDUFA5P9-201ENST00000472609 340 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC091951.3-201ENST00000504093 246 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AL390198.2-201ENST00000510553 222 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC008429.2-201ENST00000523057 864 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 MTCO1P40-201ENST00000574371 625 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC005244.1-201ENST00000582566 339 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AP001269.3-201ENST00000588718 329 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 AL139344.1-201ENST00000605228 195 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 RN7SL261P-201ENST00000613441 282 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC108359.1-201ENST00000616451 1211 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 AL031658.2-201ENST00000616850 651 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC069234.4-201ENST00000621276 412 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC005514.1-201ENST00000623521 208 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC017037.3-201ENST00000625016 472 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 OR7A1P-202ENST00000641542 1158 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 ZNF663P-202ENST00000641770 1131 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 AL731532.1-201ENST00000623972 4236 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCM2LQ9NUG4 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCM2LQ9NUG4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
CCM2LQ9NUG4 CASC19-284ENST00000642142 1868 ntBASIC6□□□□□ -1.45
CCM2LQ9NUG4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCM2LQ9NUG4 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6□□□□□ -1.45
CCM2LQ9NUG4 AC125238.2-201ENST00000430003 1440 ntBASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 AC100871.1-201ENST00000507871 1456 ntBASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 MTCO1P6-201ENST00000481192 1384 ntBASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
CCM2LQ9NUG4 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms