Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 AC006210.2-201ENST00000367074 1545 ntBASIC6.28□□□□□ -1.4
SALL1Q9NSC2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.28□□□□□ -1.4
SALL1Q9NSC2 RN7SKP153-201ENST00000365026 316 ntBASIC6.27□□□□□ -1.41
SALL1Q9NSC2 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 Y_RNA.625-201ENST00000411256 107 ntBASIC6.27□□□□□ -1.41
SALL1Q9NSC2 HYALP1-201ENST00000417674 1279 ntBASIC6.27□□□□□ -1.41
SALL1Q9NSC2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 RHOT1P3-201ENST00000436571 331 ntBASIC6.27□□□□□ -1.41
SALL1Q9NSC2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 TRY2P-201ENST00000448860 689 ntBASIC6.27□□□□□ -1.41
SALL1Q9NSC2 RPL7P41-201ENST00000485823 957 ntBASIC6.27□□□□□ -1.41
SALL1Q9NSC2 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 EIF4A2P5-201ENST00000529914 499 ntBASIC6.27□□□□□ -1.41
SALL1Q9NSC2 AC027369.5-201ENST00000533838 755 ntBASIC6.27□□□□□ -1.41
SALL1Q9NSC2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 MTCYBP13-201ENST00000578634 1093 ntBASIC6.27□□□□□ -1.41
SALL1Q9NSC2 MIR4691-201ENST00000583764 85 ntBASIC6.27□□□□□ -1.41
SALL1Q9NSC2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 AC239868.2-201ENST00000564237 4527 ntBASIC6.27□□□□□ -1.41
SALL1Q9NSC2 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
SALL1Q9NSC2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 OR9G4-201ENST00000302957 984 ntBASIC6.26□□□□□ -1.41
SALL1Q9NSC2 RNA5SP123-201ENST00000363244 119 ntBASIC6.26□□□□□ -1.41
SALL1Q9NSC2 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 MIR585-201ENST00000384887 94 ntBASIC6.26□□□□□ -1.41
SALL1Q9NSC2 MIR589-201ENST00000385238 99 ntBASIC6.26□□□□□ -1.41
SALL1Q9NSC2 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 NPM1P25-201ENST00000429734 854 ntBASIC6.26□□□□□ -1.41
SALL1Q9NSC2 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 RN7SL814P-201ENST00000487715 300 ntBASIC6.26□□□□□ -1.41
SALL1Q9NSC2 AC022133.1-201ENST00000490961 571 ntBASIC6.26□□□□□ -1.41
SALL1Q9NSC2 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 LDHBP3-201ENST00000514909 822 ntBASIC6.26□□□□□ -1.41
SALL1Q9NSC2 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 AC026367.3-201ENST00000619032 590 ntBASIC6.26□□□□□ -1.41
SALL1Q9NSC2 AP001784.1-201ENST00000624107 428 ntBASIC6.26□□□□□ -1.41
SALL1Q9NSC2 AC092376.2-201ENST00000622621 4116 ntBASIC6.26□□□□□ -1.41
SALL1Q9NSC2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.26□□□□□ -1.41
SALL1Q9NSC2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SALL1Q9NSC2 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SALL1Q9NSC2 SNORA51.8-201ENST00000384234 132 ntBASIC6.25□□□□□ -1.41
SALL1Q9NSC2 SNORA5.1-201ENST00000384275 131 ntBASIC6.25□□□□□ -1.41
SALL1Q9NSC2 SNORA48.4-201ENST00000391089 134 ntBASIC6.25□□□□□ -1.41
SALL1Q9NSC2 RN7SKP114-201ENST00000410327 279 ntBASIC6.25□□□□□ -1.41
SALL1Q9NSC2 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SALL1Q9NSC2 AC093827.1-201ENST00000480094 861 ntBASIC6.25□□□□□ -1.41
SALL1Q9NSC2 HMGN2P25-201ENST00000486956 268 ntBASIC6.25□□□□□ -1.41
SALL1Q9NSC2 RPS12P31-201ENST00000491419 398 ntBASIC6.25□□□□□ -1.41
SALL1Q9NSC2 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.25□□□□□ -1.41
SALL1Q9NSC2 RN7SKP260-201ENST00000516907 149 ntBASIC6.25□□□□□ -1.41
SALL1Q9NSC2 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.25□□□□□ -1.41
SALL1Q9NSC2 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.25□□□□□ -1.41
SALL1Q9NSC2 AC040958.1-201ENST00000561102 201 ntBASIC6.25□□□□□ -1.41
SALL1Q9NSC2 AC027216.1-201ENST00000577726 685 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms