Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 SCARNA15-201ENST00000607520 4325 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 GAPDHP24-201ENST00000328713 983 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AL009179.1-201ENST00000406085 265 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 RPS6P23-201ENST00000413224 722 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AC013429.2-201ENST00000418798 781 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 DUTP7-201ENST00000507982 486 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AC027308.1-201ENST00000517993 110 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AC134698.5-201ENST00000519444 336 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 HSPE1P2-201ENST00000554777 306 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AL451049.1-201ENST00000608672 497 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 MIR6780B-201ENST00000610307 79 ntBASIC4.76□□□□□ -1.65
HMG20AQ9NP66 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HMG20AQ9NP66 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC092435.4-201ENST00000623012 4159 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 OR51C1P-202ENST00000641159 1444 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 RNU1-146P-201ENST00000364015 165 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 RNA5SP433-201ENST00000364491 114 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 RN7SKP187-201ENST00000365536 330 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 SETP10-201ENST00000424368 814 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 FABP7P2-201ENST00000429946 379 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AL512637.1-201ENST00000439523 1231 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 GYG1P1-201ENST00000460864 698 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC020779.1-201ENST00000478757 796 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC093827.1-201ENST00000480094 861 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 RPS3AP15-201ENST00000483874 781 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 RN7SL170P-201ENST00000487098 295 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC093890.1-201ENST00000502554 540 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC114781.3-201ENST00000512083 142 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 RNA5SP249-201ENST00000516127 99 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 RNU6-964P-201ENST00000516524 69 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC060775.1-201ENST00000518241 520 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC068305.2-201ENST00000550567 1205 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 OR11H3P-201ENST00000554547 982 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC011270.1-201ENST00000558606 583 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC087283.1-201ENST00000604029 1074 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC244517.3-201ENST00000616254 1235 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC109583.2-201ENST00000617367 129 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC025262.3-201ENST00000623666 360 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC135068.5-201ENST00000624197 983 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
HMG20AQ9NP66 AC097461.1-201ENST00000568928 2821 ntBASIC4.75□□□□□ -1.65
HMG20AQ9NP66 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms