Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 MIR551A-201ENST00000385042 96 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 RNA5SP178-201ENST00000410380 128 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AJ239321.1-201ENST00000424255 564 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 MTND4LP7-201ENST00000431728 294 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 RPL17P35-201ENST00000432217 549 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 RPL19P16-201ENST00000433839 588 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 OR6D1P-201ENST00000436165 939 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AP000281.1-201ENST00000444036 316 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 KARSP1-201ENST00000451871 1752 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 OR52E3P-201ENST00000452083 936 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 SETP20-201ENST00000457046 852 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 RPS27AP2-201ENST00000457576 465 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 IMPA1P1-201ENST00000510718 842 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC112206.4-201ENST00000515142 405 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 SNORA26.10-201ENST00000516427 141 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC104997.1-201ENST00000519761 717 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC092709.1-201ENST00000521355 1045 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 MTCYBP13-201ENST00000578634 1093 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC010503.3-201ENST00000594355 540 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 FO393422.1-201ENST00000603908 708 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 AL022311.1-201ENST00000623726 19416 ntBASIC5.61□□□□□ -1.51
PCDH9Q9HC56 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDH9Q9HC56 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 RN7SKP28-201ENST00000364770 305 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 RN7SKP6-201ENST00000364795 319 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AC073909.1-201ENST00000447112 999 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 RPL31P53-201ENST00000457065 348 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 RNU7-157P-201ENST00000459600 66 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 RPL7P51-201ENST00000490532 749 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AC016559.2-201ENST00000510759 359 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AC138832.1-201ENST00000522871 556 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AC019227.1-201ENST00000526902 510 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 OR8G3P-201ENST00000533406 921 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AC022404.1-201ENST00000555320 273 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 OR7M1P-201ENST00000608946 533 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AC244107.2-201ENST00000611773 76 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AL691477.1-201ENST00000624398 162 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AC007342.5-201ENST00000571340 2142 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 DDX18P6-201ENST00000450119 1997 ntBASIC5.6□□□□□ -1.51
PCDH9Q9HC56 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
PCDH9Q9HC56 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms