Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM4Q9C037 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TRIM4Q9C037 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM4Q9C037 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM4Q9C037 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM4Q9C037 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.5□□□□□ -1.53
TRIM4Q9C037 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM4Q9C037 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 RNA5SP394-201ENST00000364216 119 ntBASIC5.5□□□□□ -1.53
TRIM4Q9C037 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 CRIP1P1-201ENST00000427567 185 ntBASIC5.5□□□□□ -1.53
TRIM4Q9C037 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 AC092447.2-201ENST00000435487 669 ntBASIC5.5□□□□□ -1.53
TRIM4Q9C037 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 GYG1P1-201ENST00000460864 698 ntBASIC5.5□□□□□ -1.53
TRIM4Q9C037 RPS4XP1-201ENST00000482189 787 ntBASIC5.5□□□□□ -1.53
TRIM4Q9C037 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 GSTP1P1-201ENST00000548078 319 ntBASIC5.5□□□□□ -1.53
TRIM4Q9C037 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.5□□□□□ -1.53
TRIM4Q9C037 AC145423.1-201ENST00000605712 336 ntBASIC5.5□□□□□ -1.53
TRIM4Q9C037 AP001784.1-201ENST00000624107 428 ntBASIC5.5□□□□□ -1.53
TRIM4Q9C037 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM4Q9C037 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM4Q9C037 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 AL449283.1-201ENST00000602631 3403 ntBASIC5.5□□□□□ -1.53
TRIM4Q9C037 ICE2P1-201ENST00000512800 1849 ntBASIC5.5□□□□□ -1.53
TRIM4Q9C037 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM4Q9C037 MFSD8-219ENST00000641228 2559 ntBASIC5.5□□□□□ -1.53
TRIM4Q9C037 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TRIM4Q9C037 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 AC000123.3-201ENST00000624029 4975 ntBASIC5.49□□□□□ -1.53
TRIM4Q9C037 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 AC015983.1-201ENST00000441577 373 ntBASIC5.49□□□□□ -1.53
TRIM4Q9C037 AC009220.1-201ENST00000451614 275 ntBASIC5.49□□□□□ -1.53
TRIM4Q9C037 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 RN7SL547P-201ENST00000490793 290 ntBASIC5.49□□□□□ -1.53
TRIM4Q9C037 RPL15P21-201ENST00000495592 567 ntBASIC5.49□□□□□ -1.53
TRIM4Q9C037 AC006530.1-201ENST00000555980 571 ntBASIC5.49□□□□□ -1.53
TRIM4Q9C037 AL163952.1-202ENST00000569625 600 ntBASIC5.49□□□□□ -1.53
TRIM4Q9C037 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 AL513327.3-201ENST00000602618 469 ntBASIC5.49□□□□□ -1.53
TRIM4Q9C037 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 AC005840.5-201ENST00000619166 599 ntBASIC5.49□□□□□ -1.53
TRIM4Q9C037 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 AC087565.3-203ENST00000641018 837 ntBASIC5.49□□□□□ -1.53
TRIM4Q9C037 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.49□□□□□ -1.53
TRIM4Q9C037 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM4Q9C037 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TRIM4Q9C037 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC000374.1-201ENST00000434698 1745 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC027279.1-201ENST00000568885 4284 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC011447.7-201ENST00000624228 1590 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM4Q9C037 AC005042.1-201ENST00000393397 800 ntBASIC5.48□□□□□ -1.53
TRIM4Q9C037 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms