Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AL645937.3-201ENST00000453647 936 ntBASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 AC098818.1-201ENST00000478593 252 ntBASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 AC021006.1-201ENST00000489849 553 ntBASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 SNORA70.20-201ENST00000516848 126 ntBASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 AP003033.2-201ENST00000528901 805 ntBASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 AC011626.1-201ENST00000604710 562 ntBASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 TAS2R6P-201ENST00000605022 826 ntBASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 AC097505.1-201ENST00000610199 565 ntBASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 DDX18P4-201ENST00000511690 1966 ntBASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 AC006210.2-201ENST00000367074 1545 ntBASIC5.18□□□□□ -1.58
CCDC28BQ9BUN5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AC000123.3-201ENST00000624029 4975 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 SCN1A-220ENST00000641603 12506 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 RNU1-65P-201ENST00000363919 148 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 RN7SKP16-201ENST00000410180 299 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 PRUNEP1-201ENST00000425846 705 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 RPL35AP21-201ENST00000437667 333 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 GAPDHP58-201ENST00000438477 1006 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AL672138.1-201ENST00000450604 1015 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 RPL21P6-201ENST00000479171 504 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 RN7SL447P-201ENST00000494711 245 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 OR5H7P-201ENST00000514084 930 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 TCP11X3P-202ENST00000514289 1254 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 RNU6-615P-201ENST00000516065 106 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 RNU6-551P-201ENST00000516661 103 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AC015802.2-201ENST00000589690 189 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 PPATP2-201ENST00000605635 508 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 MIR6774-201ENST00000614651 70 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AP003400.2-201ENST00000624036 666 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AC008691.1-209ENST00000642094 814 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 Z95327.2-201ENST00000414579 1873 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AC233968.1-201ENST00000611212 1300 ntBASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC28BQ9BUN5 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 SRRM1P3-201ENST00000426911 2678 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 MIR589-201ENST00000385238 99 ntBASIC5.16□□□□□ -1.58
CCDC28BQ9BUN5 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms