Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 RAB9AP4-201ENST00000415230 609 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC114814.2-201ENST00000419195 485 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 OR10T1P-201ENST00000424327 947 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 YME1L1P1-201ENST00000429435 297 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC016831.4-201ENST00000438302 307 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 TCEA1P1-201ENST00000449716 880 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AC010350.1-201ENST00000504908 231 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 SNORA31.9-201ENST00000516429 84 ntBASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CSMD1Q96PZ7 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 OR4K17-201ENST00000315543 1032 ntBASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 AC073465.2-201ENST00000440938 498 ntBASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 RN7SL244P-201ENST00000493405 297 ntBASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 RNA5SP428-201ENST00000365129 132 ntBASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 RNA5SP397-201ENST00000391323 118 ntBASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 AC093827.1-201ENST00000480094 861 ntBASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 AC091912.1-201ENST00000511351 248 ntBASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 AC002044.3-201ENST00000623314 541 ntBASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 MIR3138-201ENST00000585238 82 ntBASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 ARF4P1-201ENST00000605447 541 ntBASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CSMD1Q96PZ7 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 KALRN-202ENST00000291478 10888 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 AC097173.1-201ENST00000505862 819 ntBASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 SNORA9-201ENST00000384215 133 ntBASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 RN7SKP114-201ENST00000410327 279 ntBASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 RPL34P27-201ENST00000428810 349 ntBASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 MTCO1P35-201ENST00000515270 228 ntBASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 OR8R1P-201ENST00000543943 764 ntBASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CSMD1Q96PZ7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms