Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.02□□□□□ -1.61
COL21A1Q96P44 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.02□□□□□ -1.61
COL21A1Q96P44 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 AL450345.1-202ENST00000605741 3881 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
COL21A1Q96P44 RNA5SP132-201ENST00000364725 118 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 NACAP7-201ENST00000407371 609 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 AC211486.3-201ENST00000412694 621 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 GABARAPL3-201ENST00000412799 354 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 AC090018.1-201ENST00000434369 367 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.02□□□□□ -1.61
COL21A1Q96P44 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.02□□□□□ -1.61
COL21A1Q96P44 AC092754.1-201ENST00000472975 479 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 RN7SL184P-201ENST00000488308 297 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 RN7SL547P-201ENST00000490793 290 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 HMGB1P44-201ENST00000508597 572 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.02□□□□□ -1.61
COL21A1Q96P44 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.02□□□□□ -1.61
COL21A1Q96P44 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.02□□□□□ -1.61
COL21A1Q96P44 AC027369.5-201ENST00000533838 755 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.02□□□□□ -1.61
COL21A1Q96P44 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 MIR4472-2-201ENST00000582069 67 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 AC060766.1-201ENST00000590824 627 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 AC009027.1-201ENST00000604510 479 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 AC079395.2-201ENST00000610982 737 ntBASIC5.02□□□□□ -1.61
COL21A1Q96P44 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.02□□□□□ -1.61
COL21A1Q96P44 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
COL21A1Q96P44 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.02□□□□□ -1.61
COL21A1Q96P44 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL21A1Q96P44 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 AC079298.1-201ENST00000625026 1619 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL21A1Q96P44 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 RNU1-19P-201ENST00000363306 165 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 U3.25-201ENST00000391209 220 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 DBIP1-201ENST00000401435 260 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 SRSF1P1-201ENST00000424058 520 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 RPSAP41-201ENST00000439695 860 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 AC007386.1-201ENST00000455212 582 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 RPS4XP12-201ENST00000461747 709 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 AC017007.3-201ENST00000479865 435 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 AC093827.1-201ENST00000480094 861 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL21A1Q96P44 RPS12P31-201ENST00000491419 398 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 IMPA1P1-201ENST00000510718 842 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 RNU6-513P-201ENST00000516104 104 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL21A1Q96P44 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 MIR4443-201ENST00000585052 53 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 SUGT1P3-202ENST00000604259 383 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 AC000068.2-201ENST00000608816 460 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 SAMMSON-209ENST00000641222 1100 ntBASIC5.01□□□□□ -1.61
COL21A1Q96P44 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL21A1Q96P44 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL21A1Q96P44 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
COL21A1Q96P44 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL21A1Q96P44 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5□□□□□ -1.61
COL21A1Q96P44 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5□□□□□ -1.61
COL21A1Q96P44 SMG1P4-204ENST00000523028 4131 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL21A1Q96P44 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
COL21A1Q96P44 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
COL21A1Q96P44 RN7SKP160-201ENST00000363804 340 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 SNORA16A-201ENST00000384342 137 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 ZSCAN12P1-201ENST00000406489 419 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 NPM1P40-201ENST00000412758 733 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 PCNPP4-201ENST00000414817 517 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5□□□□□ -1.61
COL21A1Q96P44 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5□□□□□ -1.61
COL21A1Q96P44 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5□□□□□ -1.61
COL21A1Q96P44 GSTM5P1-201ENST00000434751 660 ntBASIC5□□□□□ -1.61
COL21A1Q96P44 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms