Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 SNORA79B-201ENST00000410557 148 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 BX119904.1-201ENST00000432026 348 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC046176.1-201ENST00000435260 1170 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AL353662.1-201ENST00000439099 327 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AL359091.1-201ENST00000449048 1734 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC069277.2-201ENST00000454211 432 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 DUXAP8-207ENST00000456786 622 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 CYCSP20-201ENST00000473154 315 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 CR383658.1-201ENST00000514609 734 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 SCARNA18.1-201ENST00000516330 83 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 FTH1P11-201ENST00000517577 551 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC021451.1-201ENST00000523498 1129 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 OR8Q1P-201ENST00000526467 655 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 EIF1P5-201ENST00000585002 234 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC008507.2-201ENST00000588402 1176 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC005034.4-201ENST00000603612 899 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 AF287957.1-201ENST00000607368 1595 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 DUXAP10-204ENST00000612052 616 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AC003985.2-201ENST00000562268 1669 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 MTCO1P15-201ENST00000529569 1526 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 AL161756.3-201ENST00000641216 2071 ntBASIC5.78□□□□□ -1.48
VPS50Q96JG6 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
VPS50Q96JG6 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VPS50Q96JG6 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.77□□□□□ -1.48
VPS50Q96JG6 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS50Q96JG6 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS50Q96JG6 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS50Q96JG6 RN7SKP28-201ENST00000364770 305 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 SNORD65-201ENST00000391079 73 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 RNU6-796P-201ENST00000391086 107 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 TAF9BP2-201ENST00000400856 499 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VPS50Q96JG6 RMRPP5-201ENST00000411156 267 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC245096.1-201ENST00000413104 546 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AL389925.1-201ENST00000432257 728 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC073410.1-201ENST00000435125 589 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 DNAJA1P5-201ENST00000440278 943 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 AL663074.2-201ENST00000440621 479 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 RPL7P55-201ENST00000450522 746 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC083795.1-201ENST00000491760 320 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 SUMO2P5-201ENST00000506790 245 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 Y_RNA.717-201ENST00000517106 92 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 RN7SKP35-201ENST00000517210 151 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC060775.1-201ENST00000518241 520 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 TRIM77BP-201ENST00000524985 1119 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC079905.1-201ENST00000549280 475 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.77□□□□□ -1.49
VPS50Q96JG6 AGGF1P5-201ENST00000567900 919 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC090826.1-203ENST00000569235 490 ntBASIC5.77□□□□□ -1.49
VPS50Q96JG6 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms