Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 LARP7P4-201ENST00000481075 878 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC008410.1-201ENST00000483777 339 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 RN7SL101P-201ENST00000496350 279 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 SUMO1P1-201ENST00000497904 306 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC112198.4-201ENST00000515450 351 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC084824.2-201ENST00000548906 345 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC008126.1-201ENST00000549019 480 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 RN7SL753P-201ENST00000581238 290 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 OR1AB1P-201ENST00000585564 761 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 BNIP3P40-201ENST00000596017 556 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AL360012.1-201ENST00000602813 131 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC005156.1-201ENST00000613371 573 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 MIR8084-201ENST00000614105 89 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC092159.4-201ENST00000624944 550 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC000095.2-202ENST00000637415 154 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 AC144833.1-201ENST00000567953 4089 ntBASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CHMP4CQ96CF2 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 MRRFP1-201ENST00000435941 1675 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 MTCO1P4-201ENST00000520516 1409 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 PDZK1P1-202ENST00000425209 1350 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 MIR16-2-201ENST00000362117 81 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 RN7SKP292-201ENST00000365522 317 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC092642.1-201ENST00000392417 425 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 TAF9BP2-201ENST00000400856 499 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 VN1R37P-201ENST00000419096 748 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 DEFA9P-201ENST00000433042 285 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 HMGB3P24-201ENST00000433260 622 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC064862.4-201ENST00000442180 334 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AL353898.1-201ENST00000444055 238 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC239798.3-201ENST00000454459 408 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AL122020.1-201ENST00000472287 459 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC006539.1-201ENST00000481419 501 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 RN7SL205P-201ENST00000490174 284 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC021483.2-201ENST00000567415 758 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC017076.1-201ENST00000607613 578 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 AC009269.6-201ENST00000621778 588 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 FRG1DP-201ENST00000635586 771 ntBASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CHMP4CQ96CF2 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 HMGB1P20-201ENST00000402555 677 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 RSL24D1P1-201ENST00000404972 493 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AL512422.1-201ENST00000407033 553 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 TATDN1P1-201ENST00000414123 891 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AL157777.1-201ENST00000468100 304 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AC098583.1-201ENST00000480875 255 ntBASIC6.87□□□□□ -1.31
CHMP4CQ96CF2 AC112518.2-201ENST00000508565 425 ntBASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms