Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC025181.1-201ENST00000477507 416 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 RPL5P22-201ENST00000480199 884 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 RN7SL741P-201ENST00000482473 289 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 RN7SL170P-201ENST00000487098 295 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 RN7SKP238-201ENST00000516483 249 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC139365.2-201ENST00000517972 253 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 HIGD1AP18-201ENST00000520730 278 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 WBP1LP3-201ENST00000523033 208 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 OR8A2P-201ENST00000528631 952 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC008083.2-201ENST00000546707 476 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTP4A1Q93096 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 ELOCP34-201ENST00000604436 327 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 KATNBL1P1-201ENST00000605192 748 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTP4A1Q93096 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AL451142.2-201ENST00000429076 2090 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PTP4A1Q93096 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PTP4A1Q93096 AC068870.1-201ENST00000563737 2455 ntBASIC5.12□□□□□ -1.59
PTP4A1Q93096 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PTP4A1Q93096 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTP4A1Q93096 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTP4A1Q93096 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 AC083899.1-201ENST00000454465 3819 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 RNFT1P3-201ENST00000340898 1052 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 RNU4-44P-201ENST00000363050 141 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 U3.7-201ENST00000363668 216 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 BMS1P3-201ENST00000372011 932 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 MIR130A-201ENST00000385274 89 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 AC004386.1-201ENST00000393214 761 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 AL512430.2-201ENST00000406786 339 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 AL354890.1-201ENST00000413730 346 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 RNF10P1-201ENST00000418589 369 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 NAP1L4P2-201ENST00000425958 899 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 VN1R110P-201ENST00000438988 971 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 LINC02210-201ENST00000444561 288 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 HMGB1P4-201ENST00000455362 567 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 RNU6-1218P-201ENST00000458990 108 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 PPIAP21-201ENST00000464473 501 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 SUMO1P1-201ENST00000497904 306 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 RN7SKP253-201ENST00000516424 309 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 AC107918.3-201ENST00000533272 382 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTP4A1Q93096 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 AC107958.1-201ENST00000556576 290 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 AL162233.1-201ENST00000620014 944 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 AC129778.1-202ENST00000623812 261 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 AL591379.1-207ENST00000635982 261 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTP4A1Q93096 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PTP4A1Q93096 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.11□□□□□ -1.59
PTP4A1Q93096 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTP4A1Q93096 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PTP4A1Q93096 PWAR1-201ENST00000624188 2414 ntBASIC5.11□□□□□ -1.59
PTP4A1Q93096 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PTP4A1Q93096 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms