Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SEMA4DQ92854 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEMA4DQ92854 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SEMA4DQ92854 MIR105-1-201ENST00000385222 81 ntBASIC5.68□□□□□ -1.5
SEMA4DQ92854 MIR589-201ENST00000385238 99 ntBASIC5.68□□□□□ -1.5
SEMA4DQ92854 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 AL391361.1-201ENST00000405580 489 ntBASIC5.68□□□□□ -1.5
SEMA4DQ92854 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SEMA4DQ92854 FAM96AP1-201ENST00000430879 482 ntBASIC5.68□□□□□ -1.5
SEMA4DQ92854 CLUHP1-201ENST00000435012 1190 ntBASIC5.68□□□□□ -1.5
SEMA4DQ92854 AC017099.1-201ENST00000448261 1028 ntBASIC5.68□□□□□ -1.5
SEMA4DQ92854 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 AC079168.1-201ENST00000458741 345 ntBASIC5.68□□□□□ -1.5
SEMA4DQ92854 AC015864.1-201ENST00000496512 544 ntBASIC5.68□□□□□ -1.5
SEMA4DQ92854 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SEMA4DQ92854 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 AC008814.1-201ENST00000603797 406 ntBASIC5.68□□□□□ -1.5
SEMA4DQ92854 IMMP1LP3-201ENST00000604197 224 ntBASIC5.68□□□□□ -1.5
SEMA4DQ92854 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEMA4DQ92854 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEMA4DQ92854 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEMA4DQ92854 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SEMA4DQ92854 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.68□□□□□ -1.5
SEMA4DQ92854 AC018628.1-201ENST00000624147 3819 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 Y_RNA.62-201ENST00000362840 99 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 RPL12P9-201ENST00000412942 488 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 AC019070.1-201ENST00000415008 1024 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 MTND4LP21-201ENST00000415303 295 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 EI24P4-201ENST00000423683 1078 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 AL500527.1-201ENST00000448532 255 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 AL513343.1-201ENST00000451818 792 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 RPS24P16-201ENST00000497294 392 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 AC024558.1-201ENST00000505008 528 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 AC009268.1-201ENST00000561352 1203 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 MIR4489-201ENST00000578869 62 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 AC069307.1-201ENST00000602820 447 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 AC007620.3-201ENST00000608131 497 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 AP000864.1-201ENST00000609424 650 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 WBP1LP8-201ENST00000617401 327 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 CASC19-264ENST00000641912 1184 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 NLRP3P1-201ENST00000622303 1785 ntBASIC5.67□□□□□ -1.5
SEMA4DQ92854 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SEMA4DQ92854 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEMA4DQ92854 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SEMA4DQ92854 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SEMA4DQ92854 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.66□□□□□ -1.5
SEMA4DQ92854 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SEMA4DQ92854 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
SEMA4DQ92854 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms