Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC106038.2-201ENST00000520706 568 ntBASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 AL138976.2-201ENST00000563989 694 ntBASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 AC083899.3-201ENST00000603413 594 ntBASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 AL121655.1-201ENST00000605811 308 ntBASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 AC020658.2-201ENST00000559030 4020 ntBASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 AC092646.2-201ENST00000431242 2095 ntBASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
SHKBP1Q8TBC3 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 MAPK10-344ENST00000641718 3746 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 RNU1-24P-201ENST00000364285 165 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 RNA5SP485-201ENST00000365053 119 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 RNU1-84P-201ENST00000365447 164 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 RNU6-692P-201ENST00000384496 107 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AL391419.1-201ENST00000398901 1275 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 ST13P16-201ENST00000401760 781 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 ATF1P1-201ENST00000406040 927 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 VTA1P1-201ENST00000414044 866 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 BTF3P8-201ENST00000414577 526 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC138393.2-201ENST00000414742 246 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 EIF4A1P1-201ENST00000420241 934 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 RPS7P12-201ENST00000422385 582 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 RAC1P8-201ENST00000427086 527 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AL136231.1-201ENST00000429407 730 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 RPSAP40-201ENST00000442343 891 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC093166.3-201ENST00000448785 303 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 RPL7P1-201ENST00000468161 747 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 RPL7P9-201ENST00000468715 747 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC113367.2-201ENST00000505749 160 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC011853.1-201ENST00000518911 454 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 UBE2NP1-201ENST00000545592 458 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AP000942.4-201ENST00000604811 241 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 OR51C1P-201ENST00000608504 942 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC093635.1-201ENST00000609028 555 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC093838.1-201ENST00000613014 469 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC025594.3-201ENST00000613068 790 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 MIR6721-201ENST00000617181 87 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AL122023.1-201ENST00000622847 530 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AP002505.2-201ENST00000623585 696 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC073592.6-201ENST00000624271 415 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AP005264.7-201ENST00000625003 745 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC073488.9-201ENST00000631601 754 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AC084782.1-201ENST00000564401 2465 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AL359715.3-201ENST00000569267 2123 ntBASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.95□□□□□ -1.3
SHKBP1Q8TBC3 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms