Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AL035079.1-201ENST00000405210 287 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AC104843.2-201ENST00000427666 297 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 RPSAP32-201ENST00000432681 526 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AC097463.1-201ENST00000447288 481 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 PTMAP3-201ENST00000447474 330 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AL035090.1-201ENST00000454835 332 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AL445433.1-201ENST00000457507 257 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AC011225.1-201ENST00000457751 369 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 RN7SL189P-201ENST00000468631 289 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 RPL29P23-201ENST00000486188 442 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AGGF1P3-201ENST00000493675 1213 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 RN7SL362P-201ENST00000494228 267 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 GUSBP9-201ENST00000510138 584 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 RNA5SP441-201ENST00000516809 88 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AP003396.4-201ENST00000527574 265 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AC122134.1-201ENST00000565664 1104 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 RN7SL708P-201ENST00000580952 299 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AC005479.3-201ENST00000602790 431 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AC009597.2-201ENST00000604659 592 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AL162431.4-201ENST00000604674 411 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AL596275.2-207ENST00000641188 675 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AL596275.2-204ENST00000641628 552 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AL596275.2-206ENST00000641957 626 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AC097461.1-201ENST00000568928 2821 ntBASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NUP35Q8NFH5 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 SNORA51.9-201ENST00000384295 124 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AL390316.1-201ENST00000406279 553 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC013268.2-201ENST00000420753 337 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC009238.2-201ENST00000431026 355 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 MTND6P18-201ENST00000439477 513 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 RPL7AP61-201ENST00000443410 636 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 NPM1P39-201ENST00000449818 867 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 HMGB1P7-201ENST00000450921 612 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC093166.2-201ENST00000455969 1017 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC079168.1-201ENST00000458741 345 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 NIP7P2-201ENST00000485801 544 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 RPL9P15-201ENST00000491096 532 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 RN7SL193P-201ENST00000491708 276 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 RN7SKP238-201ENST00000516483 249 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 RPL23AP53-201ENST00000521854 457 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 SNORD91B-202ENST00000608459 222 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC097505.1-201ENST00000610199 565 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 5S_rRNA.29-201ENST00000641250 107 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC107068.1-201ENST00000563286 4218 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NUP35Q8NFH5 MRE11P1-201ENST00000464884 2127 ntBASIC3.89□□□□□ -1.79
NUP35Q8NFH5 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms