Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
VPS8Q8N3P4 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.94□□□□□ -1.14
VPS8Q8N3P4 AC007618.1-201ENST00000366455 732 ntBASIC7.94□□□□□ -1.14
VPS8Q8N3P4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.94□□□□□ -1.14
VPS8Q8N3P4 SNORA51.8-201ENST00000384234 132 ntBASIC7.94□□□□□ -1.14
VPS8Q8N3P4 COX5BP7-201ENST00000414780 274 ntBASIC7.94□□□□□ -1.14
VPS8Q8N3P4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.94□□□□□ -1.14
VPS8Q8N3P4 AC140172.1-201ENST00000502928 141 ntBASIC7.94□□□□□ -1.14
VPS8Q8N3P4 AC021006.3-201ENST00000530771 192 ntBASIC7.94□□□□□ -1.14
VPS8Q8N3P4 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.94□□□□□ -1.14
VPS8Q8N3P4 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC7.94□□□□□ -1.14
VPS8Q8N3P4 AL049539.1-201ENST00000611964 459 ntBASIC7.94□□□□□ -1.14
VPS8Q8N3P4 AL356752.1-201ENST00000615844 593 ntBASIC7.94□□□□□ -1.14
VPS8Q8N3P4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
VPS8Q8N3P4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
VPS8Q8N3P4 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
VPS8Q8N3P4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC7.93□□□□□ -1.14
VPS8Q8N3P4 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
VPS8Q8N3P4 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
VPS8Q8N3P4 LRRC37BP1-201ENST00000398851 714 ntBASIC7.93□□□□□ -1.14
VPS8Q8N3P4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC7.93□□□□□ -1.14
VPS8Q8N3P4 OR2AM1P-201ENST00000422137 422 ntBASIC7.93□□□□□ -1.14
VPS8Q8N3P4 AL691482.1-201ENST00000453255 87 ntBASIC7.93□□□□□ -1.14
VPS8Q8N3P4 SSR3-206ENST00000476217 807 ntTSL 3 BASIC7.93□□□□□ -1.14
VPS8Q8N3P4 BTF3P13-201ENST00000513224 490 ntBASIC7.93□□□□□ -1.14
VPS8Q8N3P4 AC116553.2-201ENST00000564203 463 ntBASIC7.93□□□□□ -1.14
VPS8Q8N3P4 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC7.93□□□□□ -1.14
VPS8Q8N3P4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
VPS8Q8N3P4 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.93□□□□□ -1.14
VPS8Q8N3P4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
VPS8Q8N3P4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 CHEK2P3-201ENST00000416118 248 ntBASIC7.92□□□□□ -1.14
VPS8Q8N3P4 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 AC000111.2-201ENST00000448200 210 ntBASIC7.92□□□□□ -1.14
VPS8Q8N3P4 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 AC092376.2-201ENST00000622621 4116 ntBASIC7.92□□□□□ -1.14
VPS8Q8N3P4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.92□□□□□ -1.14
VPS8Q8N3P4 TRIM51GP-201ENST00000534741 1350 ntBASIC7.92□□□□□ -1.14
VPS8Q8N3P4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS8Q8N3P4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS8Q8N3P4 AC131971.1-201ENST00000332881 1482 ntBASIC7.91□□□□□ -1.14
VPS8Q8N3P4 AL133270.1-201ENST00000402635 279 ntBASIC7.91□□□□□ -1.14
VPS8Q8N3P4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.91□□□□□ -1.14
VPS8Q8N3P4 COX6B1P1-201ENST00000415962 213 ntBASIC7.91□□□□□ -1.14
VPS8Q8N3P4 MGAT2P2-201ENST00000427194 797 ntBASIC7.91□□□□□ -1.14
VPS8Q8N3P4 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC7.91□□□□□ -1.14
VPS8Q8N3P4 OR2A3P-201ENST00000493774 953 ntBASIC7.91□□□□□ -1.14
VPS8Q8N3P4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.91□□□□□ -1.14
VPS8Q8N3P4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7.91□□□□□ -1.14
VPS8Q8N3P4 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC7.91□□□□□ -1.14
VPS8Q8N3P4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS8Q8N3P4 TTC41P-205ENST00000551270 3963 ntBASIC7.91□□□□□ -1.14
VPS8Q8N3P4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC7.91□□□□□ -1.14
VPS8Q8N3P4 AC011453.2-201ENST00000603737 729 ntBASIC7.91□□□□□ -1.14
VPS8Q8N3P4 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.91□□□□□ -1.14
VPS8Q8N3P4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
VPS8Q8N3P4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
VPS8Q8N3P4 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
VPS8Q8N3P4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
VPS8Q8N3P4 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
VPS8Q8N3P4 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
VPS8Q8N3P4 AL136116.2-201ENST00000404020 785 ntBASIC7.9□□□□□ -1.14
VPS8Q8N3P4 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.9□□□□□ -1.14
VPS8Q8N3P4 GTF2IP5-201ENST00000414608 731 ntBASIC7.9□□□□□ -1.14
VPS8Q8N3P4 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.9□□□□□ -1.14
VPS8Q8N3P4 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.9□□□□□ -1.14
VPS8Q8N3P4 AL450023.3-201ENST00000440592 271 ntBASIC7.9□□□□□ -1.14
VPS8Q8N3P4 AL137845.2-201ENST00000444292 988 ntBASIC7.9□□□□□ -1.14
VPS8Q8N3P4 HMGB1P4-201ENST00000455362 567 ntBASIC7.9□□□□□ -1.14
VPS8Q8N3P4 AC091180.1-201ENST00000462104 372 ntBASIC7.9□□□□□ -1.14
VPS8Q8N3P4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.9□□□□□ -1.14
VPS8Q8N3P4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC7.9□□□□□ -1.14
VPS8Q8N3P4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
VPS8Q8N3P4 AC091953.3-201ENST00000623220 236 ntBASIC7.9□□□□□ -1.14
VPS8Q8N3P4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC7.9□□□□□ -1.14
VPS8Q8N3P4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC7.9□□□□□ -1.14
VPS8Q8N3P4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC7.9□□□□□ -1.14
VPS8Q8N3P4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
VPS8Q8N3P4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.9□□□□□ -1.15
VPS8Q8N3P4 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
VPS8Q8N3P4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms