Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL713922.1-201ENST00000416477 747 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 CDC42P6-201ENST00000421246 576 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC007383.1-201ENST00000445875 636 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 MEF2AP1-201ENST00000454867 863 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 OR2AF1P-201ENST00000454899 889 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 CCNJP2-201ENST00000457810 1163 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 GUSBP9-201ENST00000510138 584 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC046134.1-201ENST00000514454 666 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 RNA5SP303-201ENST00000516192 130 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 RN7SKP244-201ENST00000516513 307 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 NAP1L1P1-201ENST00000524793 1063 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC135983.3-201ENST00000528049 1226 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC012414.6-201ENST00000568241 401 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC012435.1-202ENST00000568772 240 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC007448.1-201ENST00000582714 234 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 MTCO3P22-201ENST00000603219 784 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC096553.1-201ENST00000605169 829 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC112220.3-201ENST00000605502 502 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 OR1S1-201ENST00000624470 978 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 FGG-205ENST00000407946 1636 ntTSL 5 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
RNF43Q68DV7 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RNF43Q68DV7 AC125603.4-201ENST00000621942 2699 ntBASIC7.04□□□□□ -1.28
RNF43Q68DV7 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC119674.1-204ENST00000641348 1343 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC005618.1-201ENST00000606901 3148 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF43Q68DV7 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RNF43Q68DV7 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF43Q68DV7 RNU4-21P-201ENST00000362802 126 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 RNU6-252P-201ENST00000363232 107 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 SNORD35A-201ENST00000363389 86 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 SNORA70.3-201ENST00000365075 132 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 SNORA75-201ENST00000384158 137 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RNF43Q68DV7 FDPSP5-201ENST00000399474 1057 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 RN7SKP86-201ENST00000410454 332 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 VTA1P1-201ENST00000414044 866 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 BTF3P8-201ENST00000414577 526 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 TCEA1P4-201ENST00000415066 844 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC000089.1-201ENST00000424559 801 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 C1DP1-201ENST00000426049 402 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 AL160175.1-201ENST00000428124 247 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 HMGB1P31-201ENST00000437242 427 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AL662791.1-201ENST00000441992 928 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 GTF3AP5-201ENST00000442645 697 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC245517.2-201ENST00000442890 346 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC234771.2-201ENST00000445718 597 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.03□□□□□ -1.28
RNF43Q68DV7 AC099340.1-201ENST00000475247 599 ntBASIC7.03□□□□□ -1.28
RNF43Q68DV7 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms