Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC38Q502W7 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC38Q502W7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC38Q502W7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC38Q502W7 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC38Q502W7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC38Q502W7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC38Q502W7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC38Q502W7 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC38Q502W7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 AC009962.1-201ENST00000567327 3813 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 AC093849.1-201ENST00000563631 2209 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC38Q502W7 OR9K1P-202ENST00000641111 3217 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC38Q502W7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC38Q502W7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC38Q502W7 RNU4-31P-201ENST00000384211 141 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 SNORA51.9-201ENST00000384295 124 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 MIR1275-201ENST00000408770 80 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 RPS12P17-201ENST00000438591 377 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 RPL5P7-201ENST00000444235 813 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 AL445466.1-201ENST00000448432 357 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 RPL32P14-201ENST00000463196 378 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 SETP6-201ENST00000479329 568 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 AC006539.1-201ENST00000481419 501 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 AC112518.2-201ENST00000508565 425 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 AC121161.1-201ENST00000510606 652 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 RNU6-513P-201ENST00000516104 104 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 RN7SKP238-201ENST00000516483 249 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 CIR1P1-201ENST00000524055 1133 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 AC068339.2-201ENST00000534395 618 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC38Q502W7 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC38Q502W7 AC068880.4-201ENST00000623082 495 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 AC010872.1-201ENST00000624225 675 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC38Q502W7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC38Q502W7 MTCO1P15-201ENST00000529569 1526 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 AC092376.2-201ENST00000622621 4116 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC38Q502W7 RBPJP2-201ENST00000618187 1444 ntBASIC5.98□□□□□ -1.45
CCDC38Q502W7 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC38Q502W7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC38Q502W7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC38Q502W7 OR4K17-201ENST00000315543 1032 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 RNU6-666P-201ENST00000363499 107 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 RNU6-532P-201ENST00000384318 107 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 AL138899.2-201ENST00000439139 499 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 TIMM8BP2-201ENST00000445940 251 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CCDC38Q502W7 AC118758.1-202ENST00000454719 225 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 SEPT7P3-201ENST00000455017 621 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 LDHBP2-201ENST00000456969 1005 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 RN7SL197P-201ENST00000466981 299 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 RN7SL269P-201ENST00000467795 305 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 AC098847.1-201ENST00000473094 348 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 AC091874.2-201ENST00000505889 720 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 IGKV3D-25-201ENST00000519599 235 ntBASIC5.97□□□□□ -1.45
CCDC38Q502W7 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.97□□□□□ -1.45
CCDC38Q502W7 AP005119.1-201ENST00000580956 292 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms