Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RARSP1-201ENST00000542842 1418 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S1P61966 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S1P61966 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
AP1S1P61966 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S1P61966 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
AP1S1P61966 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AP1S1P61966 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.31□□□□□ -1.56
AP1S1P61966 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
AP1S1P61966 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S1P61966 SNORA17.1-201ENST00000362945 126 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 U3.3-201ENST00000362986 216 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 MIR589-201ENST00000385238 99 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
AP1S1P61966 OR8V1P-201ENST00000395193 873 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 HSPD1P12-201ENST00000429127 1069 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.31□□□□□ -1.56
AP1S1P61966 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.31□□□□□ -1.56
AP1S1P61966 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.31□□□□□ -1.56
AP1S1P61966 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.31□□□□□ -1.56
AP1S1P61966 RN7SL177P-201ENST00000476596 299 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 IMPA1P1-201ENST00000510718 842 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.31□□□□□ -1.56
AP1S1P61966 IGLV2-28-201ENST00000520681 304 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S1P61966 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.31□□□□□ -1.56
AP1S1P61966 AC127381.1-201ENST00000555979 939 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.31□□□□□ -1.56
AP1S1P61966 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 RN7SL290P-201ENST00000578661 300 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 RN7SL708P-201ENST00000580952 299 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.31□□□□□ -1.56
AP1S1P61966 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.31□□□□□ -1.56
AP1S1P61966 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 MIR6839-201ENST00000620425 113 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 AC135068.12-201ENST00000637370 931 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S1P61966 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.31□□□□□ -1.56
AP1S1P61966 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S1P61966 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
AP1S1P61966 AL034549.2-201ENST00000618285 3373 ntBASIC5.31□□□□□ -1.56
AP1S1P61966 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S1P61966 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.31□□□□□ -1.56
AP1S1P61966 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.31□□□□□ -1.56
AP1S1P61966 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S1P61966 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S1P61966 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
AP1S1P61966 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.3□□□□□ -1.56
AP1S1P61966 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S1P61966 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.3□□□□□ -1.56
AP1S1P61966 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
AP1S1P61966 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S1P61966 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.3□□□□□ -1.56
AP1S1P61966 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.3□□□□□ -1.56
AP1S1P61966 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S1P61966 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S1P61966 AC006210.2-201ENST00000367074 1545 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 OR9K1P-201ENST00000326513 941 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 U3.7-201ENST00000363668 216 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 RNU1-43P-201ENST00000365052 165 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.3□□□□□ -1.56
AP1S1P61966 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.3□□□□□ -1.56
AP1S1P61966 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S1P61966 DUTP5-201ENST00000406790 469 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 AL445213.1-201ENST00000412589 747 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 BX510359.3-201ENST00000422168 306 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.3□□□□□ -1.56
AP1S1P61966 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.3□□□□□ -1.56
AP1S1P61966 NOP56P2-201ENST00000447491 769 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.3□□□□□ -1.56
AP1S1P61966 AL389915.2-201ENST00000454576 441 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 RN7SL189P-201ENST00000468631 289 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 RN7SL222P-201ENST00000476452 299 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 AC074386.1-201ENST00000476560 767 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 RN7SL814P-201ENST00000487715 300 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 RPL15P21-201ENST00000495592 567 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 AC072052.1-201ENST00000496556 306 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 AC006499.3-201ENST00000506077 748 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.3□□□□□ -1.56
AP1S1P61966 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S1P61966 AC006272.2-201ENST00000594725 163 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 AP005131.7-201ENST00000610087 611 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 AP002505.2-201ENST00000623585 696 ntBASIC5.3□□□□□ -1.56
AP1S1P61966 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.3□□□□□ -1.56
AP1S1P61966 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
AP1S1P61966 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S1P61966 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
AP1S1P61966 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
AP1S1P61966 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
AP1S1P61966 AC109446.4-201ENST00000623235 2755 ntBASIC5.29□□□□□ -1.56
AP1S1P61966 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
AP1S1P61966 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
AP1S1P61966 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
AP1S1P61966 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
AP1S1P61966 AP005432.1-201ENST00000580891 3485 ntBASIC5.29□□□□□ -1.56
AP1S1P61966 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
AP1S1P61966 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms