Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
AP3S2P59780 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.5□□□□□ -1.69
AP3S2P59780 Z95327.2-201ENST00000414579 1873 ntBASIC4.5□□□□□ -1.69
AP3S2P59780 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
AP3S2P59780 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.5□□□□□ -1.69
AP3S2P59780 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
AP3S2P59780 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 EIF4A1P3-201ENST00000411521 244 ntBASIC4.5□□□□□ -1.69
AP3S2P59780 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.5□□□□□ -1.69
AP3S2P59780 AC003087.1-201ENST00000412828 499 ntTSL 3 BASIC4.5□□□□□ -1.69
AP3S2P59780 BX284632.2-201ENST00000421091 399 ntBASIC4.5□□□□□ -1.69
AP3S2P59780 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.5□□□□□ -1.69
AP3S2P59780 AL512605.1-202ENST00000441919 381 ntBASIC4.5□□□□□ -1.69
AP3S2P59780 AL359955.2-201ENST00000445380 353 ntBASIC4.5□□□□□ -1.69
AP3S2P59780 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.5□□□□□ -1.69
AP3S2P59780 AL672138.1-201ENST00000450604 1015 ntBASIC4.5□□□□□ -1.69
AP3S2P59780 RPSAP37-201ENST00000470913 821 ntBASIC4.5□□□□□ -1.69
AP3S2P59780 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 HMGN1P17-201ENST00000513734 295 ntBASIC4.5□□□□□ -1.69
AP3S2P59780 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.5□□□□□ -1.69
AP3S2P59780 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
AP3S2P59780 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.5□□□□□ -1.69
AP3S2P59780 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.5□□□□□ -1.69
AP3S2P59780 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.5□□□□□ -1.69
AP3S2P59780 AC023206.1-201ENST00000605824 298 ntBASIC4.5□□□□□ -1.69
AP3S2P59780 AL135999.3-201ENST00000610501 812 ntBASIC4.5□□□□□ -1.69
AP3S2P59780 MIR6807-201ENST00000621968 92 ntBASIC4.5□□□□□ -1.69
AP3S2P59780 AC015908.5-201ENST00000623289 343 ntBASIC4.5□□□□□ -1.69
AP3S2P59780 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.5□□□□□ -1.69
AP3S2P59780 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.5□□□□□ -1.69
AP3S2P59780 AC129915.3-201ENST00000634128 948 ntBASIC4.5□□□□□ -1.69
AP3S2P59780 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
AP3S2P59780 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.5□□□□□ -1.69
AP3S2P59780 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
AP3S2P59780 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
AP3S2P59780 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.5□□□□□ -1.69
AP3S2P59780 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
AP3S2P59780 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.5□□□□□ -1.69
AP3S2P59780 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
AP3S2P59780 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
AP3S2P59780 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
AP3S2P59780 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.49□□□□□ -1.69
AP3S2P59780 SMG1P6-201ENST00000532337 2930 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 AC092435.4-201ENST00000623012 4159 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
AP3S2P59780 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP3S2P59780 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
AP3S2P59780 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
AP3S2P59780 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.49□□□□□ -1.69
AP3S2P59780 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
AP3S2P59780 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
AP3S2P59780 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP3S2P59780 RNA5SP500-201ENST00000364486 119 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
AP3S2P59780 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP3S2P59780 AL390316.1-201ENST00000406279 553 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.49□□□□□ -1.69
AP3S2P59780 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.49□□□□□ -1.69
AP3S2P59780 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC4.49□□□□□ -1.69
AP3S2P59780 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.49□□□□□ -1.69
AP3S2P59780 AC009238.2-201ENST00000431026 355 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 ARMC4P1-201ENST00000438905 707 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 AL645937.3-201ENST00000453647 936 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.49□□□□□ -1.69
AP3S2P59780 AC022795.1-201ENST00000473808 480 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.49□□□□□ -1.69
AP3S2P59780 AC020890.1-201ENST00000491837 504 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.49□□□□□ -1.69
AP3S2P59780 AL158068.1-201ENST00000506116 616 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 HMGN1P16-201ENST00000508308 283 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 TCP11X3P-202ENST00000514289 1254 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 RPL23AP53-201ENST00000521854 457 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.49□□□□□ -1.69
AP3S2P59780 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.49□□□□□ -1.69
AP3S2P59780 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.49□□□□□ -1.69
AP3S2P59780 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.49□□□□□ -1.69
AP3S2P59780 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.49□□□□□ -1.69
AP3S2P59780 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
AP3S2P59780 AC023813.4-201ENST00000607580 580 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.49□□□□□ -1.69
AP3S2P59780 AL356752.1-201ENST00000615844 593 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.49□□□□□ -1.69
AP3S2P59780 SAMMSON-209ENST00000641222 1100 ntBASIC4.49□□□□□ -1.69
AP3S2P59780 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP3S2P59780 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
AP3S2P59780 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms