Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CLRN1P58418 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CLRN1P58418 LCN1P2-201ENST00000372030 223 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 AC003045.1-201ENST00000398779 713 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 NPM1P38-201ENST00000403835 865 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 AC027644.1-201ENST00000419595 298 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 YWHAEP5-201ENST00000431545 765 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.6□□□□□ -1.51
CLRN1P58418 AC128677.1-201ENST00000436016 442 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 AC092601.1-201ENST00000444526 383 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.6□□□□□ -1.51
CLRN1P58418 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 AC093166.3-201ENST00000448785 303 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 RANP2-201ENST00000456833 229 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 RN7SL221P-201ENST00000466190 281 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 MARK2P8-201ENST00000476069 952 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 AL117351.2-201ENST00000513571 157 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 RNU6-759P-201ENST00000516740 103 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.6□□□□□ -1.51
CLRN1P58418 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.6□□□□□ -1.51
CLRN1P58418 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.6□□□□□ -1.51
CLRN1P58418 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.6□□□□□ -1.51
CLRN1P58418 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 AC024909.2-201ENST00000553035 286 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 OR11H3P-201ENST00000554547 982 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.6□□□□□ -1.51
CLRN1P58418 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.6□□□□□ -1.51
CLRN1P58418 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.6□□□□□ -1.51
CLRN1P58418 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.6□□□□□ -1.51
CLRN1P58418 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 AC116667.2-201ENST00000641075 823 ntBASIC5.6□□□□□ -1.51
CLRN1P58418 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CLRN1P58418 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.6□□□□□ -1.51
CLRN1P58418 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.6□□□□□ -1.51
CLRN1P58418 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.6□□□□□ -1.51
CLRN1P58418 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.6□□□□□ -1.51
CLRN1P58418 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CLRN1P58418 AC090220.1-201ENST00000593078 1699 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.59□□□□□ -1.51
CLRN1P58418 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.59□□□□□ -1.51
CLRN1P58418 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 AC092724.1-201ENST00000624623 3397 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.59□□□□□ -1.51
CLRN1P58418 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLRN1P58418 SNORA64.3-201ENST00000365647 134 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 RNU6-157P-201ENST00000383957 107 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 MIR551B-201ENST00000384984 96 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CLRN1P58418 AL035419.1-201ENST00000397037 564 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 AL079342.2-201ENST00000403367 482 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 AL021407.1-201ENST00000404531 386 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.59□□□□□ -1.51
CLRN1P58418 VTA1P1-201ENST00000414044 866 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 RPL21P50-201ENST00000417698 477 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.59□□□□□ -1.51
CLRN1P58418 AC006960.1-201ENST00000419980 153 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.59□□□□□ -1.51
CLRN1P58418 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 MUPP-201ENST00000438111 566 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 AC079922.1-201ENST00000443291 359 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 POU5F1P5-201ENST00000445059 658 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 AC234771.2-201ENST00000445718 597 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 HMGB1P48-201ENST00000446155 598 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.59□□□□□ -1.51
CLRN1P58418 PSMC1P13-201ENST00000458195 985 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.59□□□□□ -1.51
CLRN1P58418 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.59□□□□□ -1.51
CLRN1P58418 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.59□□□□□ -1.51
CLRN1P58418 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.59□□□□□ -1.51
CLRN1P58418 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLRN1P58418 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.59□□□□□ -1.51
CLRN1P58418 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.59□□□□□ -1.51
CLRN1P58418 MTCYBP37-201ENST00000510642 1133 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.59□□□□□ -1.51
CLRN1P58418 RNU6-232P-201ENST00000517144 64 ntBASIC5.59□□□□□ -1.51
CLRN1P58418 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms