Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AL133388.1-201ENST00000404509 287 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.13□□□□□ -1.59
PKNOX1P55347 NPM1P40-201ENST00000412758 733 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.13□□□□□ -1.59
PKNOX1P55347 RPS3P2-201ENST00000421346 701 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.13□□□□□ -1.59
PKNOX1P55347 AL161722.2-201ENST00000434731 981 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.13□□□□□ -1.59
PKNOX1P55347 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.13□□□□□ -1.59
PKNOX1P55347 BX842559.2-201ENST00000451418 605 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.13□□□□□ -1.59
PKNOX1P55347 RN7SL51P-201ENST00000468230 285 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PKNOX1P55347 RPL7P40-201ENST00000481703 745 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 AC090638.1-201ENST00000498296 909 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 PSMA2P2-201ENST00000504319 686 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.13□□□□□ -1.59
PKNOX1P55347 AC006427.1-201ENST00000514359 712 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 SNORD46.2-201ENST00000516021 102 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 AC005363.1-201ENST00000530779 351 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.13□□□□□ -1.59
PKNOX1P55347 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.13□□□□□ -1.59
PKNOX1P55347 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.13□□□□□ -1.59
PKNOX1P55347 RN7SL708P-201ENST00000580952 299 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 MTCO1P1-201ENST00000624263 1081 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.13□□□□□ -1.59
PKNOX1P55347 AC073869.10-201ENST00000642016 354 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 AC000374.1-201ENST00000434698 1745 ntBASIC5.13□□□□□ -1.59
PKNOX1P55347 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.13□□□□□ -1.59
PKNOX1P55347 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.13□□□□□ -1.59
PKNOX1P55347 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.13□□□□□ -1.59
PKNOX1P55347 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
PKNOX1P55347 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PKNOX1P55347 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PKNOX1P55347 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PKNOX1P55347 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.12□□□□□ -1.59
PKNOX1P55347 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.12□□□□□ -1.59
PKNOX1P55347 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PKNOX1P55347 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
PKNOX1P55347 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
PKNOX1P55347 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
PKNOX1P55347 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PKNOX1P55347 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.12□□□□□ -1.59
PKNOX1P55347 AC093909.5-201ENST00000621839 1799 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 AC063976.2-201ENST00000425667 3556 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PKNOX1P55347 AC017079.1-201ENST00000333650 415 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 MIR133B-201ENST00000362210 119 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 RNA5SP319-201ENST00000362768 119 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 RNU6-249P-201ENST00000363016 102 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 CXADRP1-201ENST00000398098 1095 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 AC013268.2-201ENST00000420753 337 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PKNOX1P55347 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.12□□□□□ -1.59
PKNOX1P55347 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.12□□□□□ -1.59
PKNOX1P55347 CLUHP1-201ENST00000435012 1190 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 BTG3P1-201ENST00000435859 716 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.12□□□□□ -1.59
PKNOX1P55347 RPS11P7-201ENST00000442125 465 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 AC064862.4-201ENST00000442180 334 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PKNOX1P55347 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.12□□□□□ -1.59
PKNOX1P55347 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.12□□□□□ -1.59
PKNOX1P55347 AC084754.1-201ENST00000463466 464 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 NDUFA5P5-201ENST00000468361 342 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 RN7SL189P-201ENST00000468631 289 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 AC094085.1-201ENST00000468914 584 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 AC007998.1-201ENST00000474156 672 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.12□□□□□ -1.59
PKNOX1P55347 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.12□□□□□ -1.59
PKNOX1P55347 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.12□□□□□ -1.59
PKNOX1P55347 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.12□□□□□ -1.59
PKNOX1P55347 AC074087.1-201ENST00000512059 724 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.12□□□□□ -1.59
PKNOX1P55347 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.12□□□□□ -1.59
PKNOX1P55347 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.12□□□□□ -1.59
PKNOX1P55347 BLZF2P-201ENST00000553776 1130 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 AC127381.1-201ENST00000555979 939 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.12□□□□□ -1.59
PKNOX1P55347 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.12□□□□□ -1.59
PKNOX1P55347 MIR1273E-201ENST00000581165 102 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.12□□□□□ -1.59
PKNOX1P55347 AC000068.2-201ENST00000608816 460 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PKNOX1P55347 CXADRP3-202ENST00000617265 1100 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PKNOX1P55347 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PKNOX1P55347 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.12□□□□□ -1.59
PKNOX1P55347 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
PKNOX1P55347 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PKNOX1P55347 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PKNOX1P55347 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PKNOX1P55347 AL022393.1-201ENST00000625142 1677 ntBASIC5.12□□□□□ -1.59
PKNOX1P55347 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PKNOX1P55347 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PKNOX1P55347 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.11□□□□□ -1.59
PKNOX1P55347 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PKNOX1P55347 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PKNOX1P55347 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.11□□□□□ -1.59
PKNOX1P55347 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 1345.5 ms