Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC093655.2-201ENST00000425735 631 ntBASIC5.68□□□□□ -1.5
CASP4P49662 RPS4XP16-201ENST00000427198 791 ntBASIC5.68□□□□□ -1.5
CASP4P49662 NANOGP4-201ENST00000427230 913 ntBASIC5.68□□□□□ -1.5
CASP4P49662 RPS11P7-201ENST00000442125 465 ntBASIC5.68□□□□□ -1.5
CASP4P49662 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.68□□□□□ -1.5
CASP4P49662 GAPDHP14-201ENST00000450472 937 ntBASIC5.68□□□□□ -1.5
CASP4P49662 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.68□□□□□ -1.5
CASP4P49662 NIFKP7-201ENST00000503365 834 ntBASIC5.68□□□□□ -1.5
CASP4P49662 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.68□□□□□ -1.5
CASP4P49662 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.68□□□□□ -1.5
CASP4P49662 AC134349.2-201ENST00000535136 910 ntBASIC5.68□□□□□ -1.5
CASP4P49662 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.68□□□□□ -1.5
CASP4P49662 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.68□□□□□ -1.5
CASP4P49662 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 AC040958.1-201ENST00000561102 201 ntBASIC5.68□□□□□ -1.5
CASP4P49662 AC007225.2-201ENST00000562529 256 ntBASIC5.68□□□□□ -1.5
CASP4P49662 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 RN7SL753P-201ENST00000581238 290 ntBASIC5.68□□□□□ -1.5
CASP4P49662 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.68□□□□□ -1.5
CASP4P49662 AC107993.1-201ENST00000591343 684 ntBASIC5.68□□□□□ -1.5
CASP4P49662 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.68□□□□□ -1.5
CASP4P49662 AP005131.7-201ENST00000610087 611 ntBASIC5.68□□□□□ -1.5
CASP4P49662 AC118658.2-201ENST00000618697 459 ntBASIC5.68□□□□□ -1.5
CASP4P49662 AC090527.3-201ENST00000619041 548 ntBASIC5.68□□□□□ -1.5
CASP4P49662 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.68□□□□□ -1.5
CASP4P49662 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CASP4P49662 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 MTCO1P46-201ENST00000451639 1491 ntBASIC5.68□□□□□ -1.5
CASP4P49662 AC005005.4-201ENST00000623789 16698 ntBASIC5.68□□□□□ -1.5
CASP4P49662 AC027279.1-201ENST00000568885 4284 ntBASIC5.68□□□□□ -1.5
CASP4P49662 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CASP4P49662 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CASP4P49662 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.68□□□□□ -1.5
CASP4P49662 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.68□□□□□ -1.5
CASP4P49662 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CASP4P49662 PABPC1P6-201ENST00000445594 1829 ntBASIC5.67□□□□□ -1.5
CASP4P49662 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.67□□□□□ -1.5
CASP4P49662 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CASP4P49662 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CASP4P49662 GVINP1-202ENST00000531871 7271 ntBASIC5.67□□□□□ -1.5
CASP4P49662 TET1P1-201ENST00000426627 2301 ntBASIC5.67□□□□□ -1.5
CASP4P49662 DUTP5-201ENST00000406790 469 ntBASIC5.67□□□□□ -1.5
CASP4P49662 COX5BP7-201ENST00000414780 274 ntBASIC5.67□□□□□ -1.5
CASP4P49662 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CASP4P49662 MGAT2P2-201ENST00000427194 797 ntBASIC5.67□□□□□ -1.5
CASP4P49662 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.67□□□□□ -1.5
CASP4P49662 AL606490.1-201ENST00000452266 765 ntBASIC5.67□□□□□ -1.5
CASP4P49662 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.67□□□□□ -1.5
CASP4P49662 Z92846.1-201ENST00000456203 268 ntBASIC5.67□□□□□ -1.5
CASP4P49662 OR2AO1P-201ENST00000476497 403 ntBASIC5.67□□□□□ -1.5
CASP4P49662 RPS21P4-201ENST00000487122 248 ntBASIC5.67□□□□□ -1.5
CASP4P49662 AC072052.1-201ENST00000496556 306 ntBASIC5.67□□□□□ -1.5
CASP4P49662 AC011411.1-201ENST00000509592 876 ntBASIC5.67□□□□□ -1.5
CASP4P49662 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.67□□□□□ -1.5
CASP4P49662 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.67□□□□□ -1.5
CASP4P49662 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.67□□□□□ -1.5
CASP4P49662 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.67□□□□□ -1.5
CASP4P49662 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.67□□□□□ -1.5
CASP4P49662 AL512329.2-201ENST00000607350 548 ntBASIC5.67□□□□□ -1.5
CASP4P49662 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.67□□□□□ -1.5
CASP4P49662 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.67□□□□□ -1.5
CASP4P49662 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CASP4P49662 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CASP4P49662 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.67□□□□□ -1.5
CASP4P49662 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.67□□□□□ -1.5
CASP4P49662 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.67□□□□□ -1.5
CASP4P49662 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.67□□□□□ -1.5
CASP4P49662 AC002525.1-201ENST00000624392 1622 ntBASIC5.66□□□□□ -1.5
CASP4P49662 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CASP4P49662 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CASP4P49662 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.66□□□□□ -1.5
CASP4P49662 OR8V1P-201ENST00000395193 873 ntBASIC5.66□□□□□ -1.5
CASP4P49662 NPM1P37-201ENST00000403105 874 ntBASIC5.66□□□□□ -1.5
CASP4P49662 MIR1286-201ENST00000408112 78 ntBASIC5.66□□□□□ -1.5
CASP4P49662 RN7SKP16-201ENST00000410180 299 ntBASIC5.66□□□□□ -1.5
CASP4P49662 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.66□□□□□ -1.5
CASP4P49662 SLC35E1P1-201ENST00000419313 864 ntBASIC5.66□□□□□ -1.5
CASP4P49662 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.66□□□□□ -1.5
CASP4P49662 AC046176.1-201ENST00000435260 1170 ntBASIC5.66□□□□□ -1.5
CASP4P49662 RPS29P10-201ENST00000439197 166 ntBASIC5.66□□□□□ -1.5
CASP4P49662 FAR2P1-206ENST00000449736 709 ntBASIC5.66□□□□□ -1.5
CASP4P49662 BX842559.2-201ENST00000451418 605 ntBASIC5.66□□□□□ -1.5
CASP4P49662 AC009127.1-201ENST00000467090 155 ntBASIC5.66□□□□□ -1.5
CASP4P49662 AC008953.1-201ENST00000497334 318 ntBASIC5.66□□□□□ -1.5
CASP4P49662 AC012400.1-201ENST00000518452 381 ntBASIC5.66□□□□□ -1.5
CASP4P49662 AC100784.1-201ENST00000522790 310 ntBASIC5.66□□□□□ -1.5
CASP4P49662 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.66□□□□□ -1.5
CASP4P49662 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.66□□□□□ -1.5
CASP4P49662 OR4A46P-201ENST00000527255 933 ntBASIC5.66□□□□□ -1.5
CASP4P49662 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.66□□□□□ -1.5
CASP4P49662 AP005432.2-201ENST00000608162 586 ntBASIC5.66□□□□□ -1.5
CASP4P49662 AC008115.4-201ENST00000619780 775 ntBASIC5.66□□□□□ -1.5
CASP4P49662 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.66□□□□□ -1.5
CASP4P49662 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CASP4P49662 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CASP4P49662 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms