Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.73□□□□□ -1.65
SRP9P49458 uc_338.7-201ENST00000621834 124 ntBASIC4.73□□□□□ -1.65
SRP9P49458 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
SRP9P49458 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SRP9P49458 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.73□□□□□ -1.65
SRP9P49458 AL672167.1-204ENST00000641875 3017 ntBASIC4.73□□□□□ -1.65
SRP9P49458 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SRP9P49458 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SRP9P49458 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SRP9P49458 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SRP9P49458 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SRP9P49458 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.72□□□□□ -1.65
SRP9P49458 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
SRP9P49458 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SRP9P49458 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SRP9P49458 RN7SKP28-201ENST00000364770 305 ntBASIC4.72□□□□□ -1.65
SRP9P49458 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SRP9P49458 MIR143-201ENST00000385300 106 ntBASIC4.72□□□□□ -1.65
SRP9P49458 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.72□□□□□ -1.65
SRP9P49458 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.72□□□□□ -1.65
SRP9P49458 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.72□□□□□ -1.65
SRP9P49458 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.72□□□□□ -1.65
SRP9P49458 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.72□□□□□ -1.65
SRP9P49458 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.72□□□□□ -1.65
SRP9P49458 VDAC2P4-201ENST00000452925 711 ntBASIC4.72□□□□□ -1.65
SRP9P49458 AC016724.1-201ENST00000453215 421 ntBASIC4.72□□□□□ -1.65
SRP9P49458 AL358876.1-201ENST00000453364 1075 ntBASIC4.72□□□□□ -1.65
SRP9P49458 RN7SL51P-201ENST00000468230 285 ntBASIC4.72□□□□□ -1.65
SRP9P49458 RN7SL717P-201ENST00000478343 297 ntBASIC4.72□□□□□ -1.65
SRP9P49458 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.72□□□□□ -1.65
SRP9P49458 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.72□□□□□ -1.65
SRP9P49458 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.72□□□□□ -1.65
SRP9P49458 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SRP9P49458 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SRP9P49458 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.72□□□□□ -1.65
SRP9P49458 AC015720.2-201ENST00000567709 334 ntBASIC4.72□□□□□ -1.65
SRP9P49458 MIR3936-201ENST00000584304 110 ntBASIC4.72□□□□□ -1.65
SRP9P49458 AC012616.1-201ENST00000600294 197 ntBASIC4.72□□□□□ -1.65
SRP9P49458 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.72□□□□□ -1.65
SRP9P49458 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.72□□□□□ -1.65
SRP9P49458 RNA5SP440-201ENST00000612665 119 ntBASIC4.72□□□□□ -1.65
SRP9P49458 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.72□□□□□ -1.65
SRP9P49458 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.72□□□□□ -1.65
SRP9P49458 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SRP9P49458 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.72□□□□□ -1.65
SRP9P49458 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SRP9P49458 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SRP9P49458 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SRP9P49458 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SRP9P49458 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SRP9P49458 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SRP9P49458 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SRP9P49458 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SRP9P49458 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.71□□□□□ -1.65
SRP9P49458 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SRP9P49458 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.71□□□□□ -1.65
SRP9P49458 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SRP9P49458 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
SRP9P49458 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SRP9P49458 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.71□□□□□ -1.66
SRP9P49458 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.71□□□□□ -1.66
SRP9P49458 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SRP9P49458 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SRP9P49458 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SRP9P49458 RNA5SP319-201ENST00000362768 119 ntBASIC4.71□□□□□ -1.66
SRP9P49458 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.71□□□□□ -1.66
SRP9P49458 AC234781.4-201ENST00000419384 244 ntBASIC4.71□□□□□ -1.66
SRP9P49458 TRGV5P-201ENST00000419915 354 ntBASIC4.71□□□□□ -1.66
SRP9P49458 AC017019.1-201ENST00000426129 261 ntBASIC4.71□□□□□ -1.66
SRP9P49458 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.71□□□□□ -1.66
SRP9P49458 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
SRP9P49458 AC092447.2-201ENST00000435487 669 ntBASIC4.71□□□□□ -1.66
SRP9P49458 AC073909.1-201ENST00000447112 999 ntBASIC4.71□□□□□ -1.66
SRP9P49458 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.71□□□□□ -1.66
SRP9P49458 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.71□□□□□ -1.66
SRP9P49458 RPSAP39-201ENST00000467439 883 ntBASIC4.71□□□□□ -1.66
SRP9P49458 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SRP9P49458 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SRP9P49458 RN7SL466P-201ENST00000497546 295 ntBASIC4.71□□□□□ -1.66
SRP9P49458 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.71□□□□□ -1.66
SRP9P49458 SCARNA20.4-201ENST00000516969 131 ntBASIC4.71□□□□□ -1.66
SRP9P49458 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.71□□□□□ -1.66
SRP9P49458 AC090022.1-201ENST00000546569 311 ntBASIC4.71□□□□□ -1.66
SRP9P49458 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.71□□□□□ -1.66
SRP9P49458 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.71□□□□□ -1.66
SRP9P49458 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.71□□□□□ -1.66
SRP9P49458 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.71□□□□□ -1.66
SRP9P49458 AL512356.3-201ENST00000623005 461 ntBASIC4.71□□□□□ -1.66
SRP9P49458 MIR4302-201ENST00000638058 60 ntBASIC4.71□□□□□ -1.66
SRP9P49458 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SRP9P49458 AC027279.1-201ENST00000568885 4284 ntBASIC4.71□□□□□ -1.66
SRP9P49458 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SRP9P49458 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SRP9P49458 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.71□□□□□ -1.66
SRP9P49458 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
SRP9P49458 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SRP9P49458 AC063923.1-201ENST00000478982 1619 ntBASIC4.71□□□□□ -1.66
SRP9P49458 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SRP9P49458 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SRP9P49458 AC011503.2-201ENST00000594230 1500 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms