Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
PTPN9P43378 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN9P43378 AC004158.1-201ENST00000564508 4319 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPN9P43378 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN9P43378 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.76□□□□□ -1.49
PTPN9P43378 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPN9P43378 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PTPN9P43378 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN9P43378 U3.28-201ENST00000391249 210 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 AL356057.1-202ENST00000402263 756 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 OR6E1P-201ENST00000414424 923 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
PTPN9P43378 MTND2P15-201ENST00000418575 892 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.76□□□□□ -1.49
PTPN9P43378 RPL5P2-201ENST00000429598 854 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 NDUFB4P8-201ENST00000435351 367 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 AL138787.1-202ENST00000437804 898 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPN9P43378 AC019185.1-201ENST00000442718 389 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 RPL36AP39-201ENST00000445859 318 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 GXYLT1P1-201ENST00000446657 490 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 BUD31P2-201ENST00000449374 300 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 RPL12P24-201ENST00000474907 486 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPN9P43378 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPN9P43378 PPIAP19-201ENST00000486414 492 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 AC016550.1-201ENST00000505348 785 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 AC091912.1-201ENST00000511351 248 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPN9P43378 AP003102.1-201ENST00000525638 661 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN9P43378 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
PTPN9P43378 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPN9P43378 MIR3614-201ENST00000581261 86 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.76□□□□□ -1.49
PTPN9P43378 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPN9P43378 AC012213.4-201ENST00000606457 354 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 AC120053.1-201ENST00000607706 736 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.76□□□□□ -1.49
PTPN9P43378 AL592494.3-201ENST00000609485 464 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 AC015922.4-201ENST00000612568 690 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.76□□□□□ -1.49
PTPN9P43378 AL118522.2-201ENST00000616045 615 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 AP001962.1-201ENST00000624114 559 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.76□□□□□ -1.49
PTPN9P43378 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.76□□□□□ -1.49
PTPN9P43378 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN9P43378 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN9P43378 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPN9P43378 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.76□□□□□ -1.49
PTPN9P43378 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN9P43378 AC104964.3-201ENST00000606115 2860 ntBASIC5.76□□□□□ -1.49
PTPN9P43378 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PTPN9P43378 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN9P43378 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
PTPN9P43378 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 AC116158.1-201ENST00000560231 2129 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.75□□□□□ -1.49
PTPN9P43378 AC144833.1-201ENST00000567953 4089 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.75□□□□□ -1.49
PTPN9P43378 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
PTPN9P43378 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN9P43378 AC017002.4-201ENST00000604721 1525 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PTPN9P43378 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN9P43378 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
PTPN9P43378 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PTPN9P43378 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PTPN9P43378 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PTPN9P43378 RN7SKP28-201ENST00000364770 305 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.75□□□□□ -1.49
PTPN9P43378 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.75□□□□□ -1.49
PTPN9P43378 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.75□□□□□ -1.49
PTPN9P43378 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.75□□□□□ -1.49
PTPN9P43378 AL356968.2-201ENST00000412769 1257 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 TNPO1P1-201ENST00000423641 1138 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.75□□□□□ -1.49
PTPN9P43378 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.75□□□□□ -1.49
PTPN9P43378 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.75□□□□□ -1.49
PTPN9P43378 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.75□□□□□ -1.49
PTPN9P43378 RPL12P11-201ENST00000439970 501 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 AL161636.2-201ENST00000445179 927 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.75□□□□□ -1.49
PTPN9P43378 CCRL1P1-201ENST00000449542 1053 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 AC090602.1-201ENST00000469695 252 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 RN7SL273P-201ENST00000481561 299 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.75□□□□□ -1.49
PTPN9P43378 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.75□□□□□ -1.49
PTPN9P43378 GOLGA5P1-201ENST00000507317 980 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 AC016550.3-201ENST00000515706 767 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 SEPT10P1-201ENST00000517342 1162 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 TMEM97P2-201ENST00000517841 403 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.75□□□□□ -1.49
PTPN9P43378 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.75□□□□□ -1.49
PTPN9P43378 AC112191.2-201ENST00000522428 333 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.75□□□□□ -1.49
PTPN9P43378 AL121839.1-201ENST00000556233 1185 ntBASIC5.75□□□□□ -1.49
PTPN9P43378 AC126365.2-201ENST00000580630 379 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms