Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
BRCA1P38398 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
BRCA1P38398 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.21□□□□□ -1.41
BRCA1P38398 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
BRCA1P38398 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.21□□□□□ -1.41
BRCA1P38398 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.41
BRCA1P38398 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
BRCA1P38398 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
BRCA1P38398 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC6.21□□□□□ -1.42
BRCA1P38398 AC079097.1-201ENST00000512187 1399 ntBASIC6.21□□□□□ -1.42
BRCA1P38398 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA1P38398 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.21□□□□□ -1.42
BRCA1P38398 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA1P38398 SNORD113.2-201ENST00000364166 89 ntBASIC6.21□□□□□ -1.42
BRCA1P38398 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA1P38398 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.21□□□□□ -1.42
BRCA1P38398 MTND4LP17-201ENST00000414607 293 ntBASIC6.21□□□□□ -1.42
BRCA1P38398 RPL7P57-201ENST00000423238 740 ntBASIC6.21□□□□□ -1.42
BRCA1P38398 OR2B7P-201ENST00000429302 934 ntBASIC6.21□□□□□ -1.42
BRCA1P38398 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA1P38398 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.21□□□□□ -1.42
BRCA1P38398 MED28P3-201ENST00000444288 531 ntBASIC6.21□□□□□ -1.42
BRCA1P38398 AC034236.1-201ENST00000469891 373 ntBASIC6.21□□□□□ -1.42
BRCA1P38398 AC005412.2-201ENST00000492004 341 ntBASIC6.21□□□□□ -1.42
BRCA1P38398 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.21□□□□□ -1.42
BRCA1P38398 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.21□□□□□ -1.42
BRCA1P38398 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.21□□□□□ -1.42
BRCA1P38398 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.42
BRCA1P38398 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
BRCA1P38398 AC123769.2-201ENST00000624332 5984 ntBASIC6.21□□□□□ -1.42
BRCA1P38398 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
BRCA1P38398 AC003973.3-201ENST00000624863 2822 ntBASIC6.21□□□□□ -1.42
BRCA1P38398 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.21□□□□□ -1.42
BRCA1P38398 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA1P38398 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA1P38398 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.2□□□□□ -1.42
BRCA1P38398 RNU1-13P-201ENST00000384499 162 ntBASIC6.2□□□□□ -1.42
BRCA1P38398 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.2□□□□□ -1.42
BRCA1P38398 CEACAMP6-201ENST00000452007 574 ntBASIC6.2□□□□□ -1.42
BRCA1P38398 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.2□□□□□ -1.42
BRCA1P38398 AC022034.3-201ENST00000471393 478 ntBASIC6.2□□□□□ -1.42
BRCA1P38398 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.2□□□□□ -1.42
BRCA1P38398 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
BRCA1P38398 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC6.2□□□□□ -1.42
BRCA1P38398 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA1P38398 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
BRCA1P38398 AC009951.1-201ENST00000623674 2614 ntBASIC6.2□□□□□ -1.42
BRCA1P38398 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.2□□□□□ -1.42
BRCA1P38398 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA1P38398 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA1P38398 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
BRCA1P38398 AC068769.1-201ENST00000474767 2426 ntBASIC6.2□□□□□ -1.42
BRCA1P38398 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.2□□□□□ -1.42
BRCA1P38398 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA1P38398 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.19□□□□□ -1.42
BRCA1P38398 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.19□□□□□ -1.42
BRCA1P38398 RPL7P32-201ENST00000457119 744 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.19□□□□□ -1.42
BRCA1P38398 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.19□□□□□ -1.42
BRCA1P38398 AP003080.1-202ENST00000526526 915 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.19□□□□□ -1.42
BRCA1P38398 RPL12P25-202ENST00000598100 674 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 AC008782.1-201ENST00000603386 430 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 MIR92B-201ENST00000607575 96 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCA1P38398 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCA1P38398 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCA1P38398 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCA1P38398 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA1P38398 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA1P38398 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA1P38398 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA1P38398 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA1P38398 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA1P38398 RN7SKP227-201ENST00000364445 330 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 RPL21P108-201ENST00000413857 481 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 OR1H1P-201ENST00000448731 937 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 Z95152.1-201ENST00000453556 656 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 RPL7AP10-201ENST00000481016 791 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 AK3P4-201ENST00000504283 583 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.19□□□□□ -1.42
BRCA1P38398 RNA5SP143-201ENST00000516936 115 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 AP001781.1-201ENST00000530977 207 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.19□□□□□ -1.42
BRCA1P38398 EIF1P5-201ENST00000585002 234 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 MIR6716-201ENST00000613413 80 ntBASIC6.19□□□□□ -1.42
BRCA1P38398 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
BRCA1P38398 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCA1P38398 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BRCA1P38398 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCA1P38398 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.19□□□□□ -1.42
BRCA1P38398 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
BRCA1P38398 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
BRCA1P38398 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.19□□□□□ -1.42
BRCA1P38398 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.18□□□□□ -1.42
BRCA1P38398 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BRCA1P38398 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.18□□□□□ -1.42
BRCA1P38398 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
BRCA1P38398 RPL23AP17-201ENST00000401064 499 ntBASIC6.18□□□□□ -1.42
BRCA1P38398 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms