Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.17□□□□□ -1.42
HOXC12P31275 AC116917.1-201ENST00000520558 305 ntBASIC6.17□□□□□ -1.42
HOXC12P31275 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC12P31275 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXC12P31275 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXC12P31275 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXC12P31275 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXC12P31275 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXC12P31275 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXC12P31275 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.17□□□□□ -1.42
HOXC12P31275 PCNPP1-201ENST00000552501 511 ntBASIC6.17□□□□□ -1.42
HOXC12P31275 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXC12P31275 AC074051.3-201ENST00000570238 358 ntBASIC6.17□□□□□ -1.42
HOXC12P31275 MIR4801-201ENST00000582704 82 ntBASIC6.17□□□□□ -1.42
HOXC12P31275 AC009955.2-201ENST00000597288 542 ntBASIC6.17□□□□□ -1.42
HOXC12P31275 AC011500.1-201ENST00000601963 469 ntBASIC6.17□□□□□ -1.42
HOXC12P31275 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXC12P31275 AC004948.1-201ENST00000609858 672 ntBASIC6.17□□□□□ -1.42
HOXC12P31275 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXC12P31275 AL136097.3-201ENST00000611097 505 ntBASIC6.17□□□□□ -1.42
HOXC12P31275 AC183089.2-201ENST00000637931 916 ntBASIC6.17□□□□□ -1.42
HOXC12P31275 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
HOXC12P31275 AC006927.3-201ENST00000638789 384 ntBASIC6.17□□□□□ -1.42
HOXC12P31275 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HOXC12P31275 AL121950.1-201ENST00000624993 2077 ntBASIC6.17□□□□□ -1.42
HOXC12P31275 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXC12P31275 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HOXC12P31275 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC12P31275 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC12P31275 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HOXC12P31275 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXC12P31275 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC12P31275 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXC12P31275 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HOXC12P31275 PPBPP2-201ENST00000513150 1362 ntBASIC6.17□□□□□ -1.42
HOXC12P31275 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
HOXC12P31275 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC12P31275 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXC12P31275 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXC12P31275 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXC12P31275 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
HOXC12P31275 AL161912.4-201ENST00000623889 2468 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 RNA5SP514-201ENST00000363717 111 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 RN7SKP269-201ENST00000365545 319 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 Y_RNA.408-201ENST00000383987 102 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 MIR16-1-201ENST00000385271 89 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXC12P31275 AC245060.4-201ENST00000413293 1121 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXC12P31275 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC12P31275 AC007365.2-201ENST00000428806 458 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXC12P31275 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC12P31275 RPL3P11-201ENST00000434028 1146 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC12P31275 COX6CP2-201ENST00000444980 225 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 DDX39BP2-208ENST00000453923 258 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 AC010878.1-201ENST00000456500 1047 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 RNU7-27P-201ENST00000459281 62 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXC12P31275 RN7SL143P-201ENST00000496780 297 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 SSX8-201ENST00000506270 579 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 AC109927.2-201ENST00000506416 303 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 AC113430.1-201ENST00000506872 718 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 AC010460.1-201ENST00000507087 466 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC12P31275 RNU6-1225P-201ENST00000516336 65 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC12P31275 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC12P31275 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC12P31275 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC12P31275 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
HOXC12P31275 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXC12P31275 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC12P31275 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC6.16□□□□□ -1.42
HOXC12P31275 NMNAT1P5-201ENST00000559657 841 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXC12P31275 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXC12P31275 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXC12P31275 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HOXC12P31275 AC011447.2-201ENST00000592921 283 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXC12P31275 AL031775.1-201ENST00000607014 887 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXC12P31275 DLEU2_1.1-201ENST00000612089 120 ntBASIC6.16□□□□□ -1.42
HOXC12P31275 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms