Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC8.17□□□□□ -1.1
CLIP1P30622 AC093414.1-201ENST00000434712 514 ntBASIC8.17□□□□□ -1.1
CLIP1P30622 AL354714.3-201ENST00000447284 493 ntBASIC8.17□□□□□ -1.1
CLIP1P30622 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC8.17□□□□□ -1.1
CLIP1P30622 OR51K1P-201ENST00000510214 950 ntBASIC8.17□□□□□ -1.1
CLIP1P30622 RN7SKP260-201ENST00000516907 149 ntBASIC8.17□□□□□ -1.1
CLIP1P30622 OR7E128P-201ENST00000532736 1024 ntBASIC8.17□□□□□ -1.1
CLIP1P30622 AC027369.5-201ENST00000533838 755 ntBASIC8.17□□□□□ -1.1
CLIP1P30622 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC8.17□□□□□ -1.1
CLIP1P30622 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CLIP1P30622 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC8.17□□□□□ -1.1
CLIP1P30622 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC8.17□□□□□ -1.1
CLIP1P30622 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC8.17□□□□□ -1.1
CLIP1P30622 AL137141.1-201ENST00000624622 4836 ntBASIC8.17□□□□□ -1.1
CLIP1P30622 ALB-202ENST00000401494 1659 ntTSL 5 BASIC8.17□□□□□ -1.1
CLIP1P30622 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CLIP1P30622 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CLIP1P30622 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC8.16□□□□□ -1.1
CLIP1P30622 OR9K1P-202ENST00000641111 3217 ntBASIC8.16□□□□□ -1.1
CLIP1P30622 RN7SKP149-201ENST00000363008 344 ntBASIC8.16□□□□□ -1.1
CLIP1P30622 GJA6P-201ENST00000415117 1042 ntBASIC8.16□□□□□ -1.1
CLIP1P30622 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC8.16□□□□□ -1.1
CLIP1P30622 TEX41-205ENST00000431734 529 ntTSL 4 BASIC8.16□□□□□ -1.1
CLIP1P30622 AC046176.1-201ENST00000435260 1170 ntBASIC8.16□□□□□ -1.1
CLIP1P30622 IGHV5-78-201ENST00000450948 295 ntBASIC8.16□□□□□ -1.1
CLIP1P30622 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC8.16□□□□□ -1.1
CLIP1P30622 snoU13.20-201ENST00000459180 104 ntBASIC8.16□□□□□ -1.1
CLIP1P30622 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC8.16□□□□□ -1.1
CLIP1P30622 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC8.16□□□□□ -1.1
CLIP1P30622 AC009117.1-201ENST00000563948 554 ntBASIC8.16□□□□□ -1.1
CLIP1P30622 ELOCP28-201ENST00000590044 317 ntBASIC8.16□□□□□ -1.1
CLIP1P30622 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC8.16□□□□□ -1.1
CLIP1P30622 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC8.16□□□□□ -1.1
CLIP1P30622 MIPEPP2-201ENST00000422560 1819 ntBASIC8.16□□□□□ -1.1
CLIP1P30622 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
CLIP1P30622 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC8.16□□□□□ -1.1
CLIP1P30622 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CLIP1P30622 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC8.16□□□□□ -1.1
CLIP1P30622 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
CLIP1P30622 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
CLIP1P30622 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CLIP1P30622 AC013442.1-201ENST00000397347 228 ntBASIC8.15□□□□□ -1.1
CLIP1P30622 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC8.15□□□□□ -1.1
CLIP1P30622 RPS29P9-201ENST00000440360 171 ntBASIC8.15□□□□□ -1.1
CLIP1P30622 RPL7AP61-201ENST00000443410 636 ntBASIC8.15□□□□□ -1.1
CLIP1P30622 GYG1P1-201ENST00000460864 698 ntBASIC8.15□□□□□ -1.1
CLIP1P30622 AC010350.1-201ENST00000504908 231 ntBASIC8.15□□□□□ -1.1
CLIP1P30622 MGST2-204ENST00000506797 634 ntTSL 2 BASIC8.15□□□□□ -1.1
CLIP1P30622 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC8.15□□□□□ -1.1
CLIP1P30622 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC8.15□□□□□ -1.1
CLIP1P30622 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC8.15□□□□□ -1.1
CLIP1P30622 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC8.15□□□□□ -1.1
CLIP1P30622 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
CLIP1P30622 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC8.15□□□□□ -1.1
CLIP1P30622 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC8.15□□□□□ -1.1
CLIP1P30622 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
CLIP1P30622 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC8.15□□□□□ -1.11
CLIP1P30622 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC8.15□□□□□ -1.11
CLIP1P30622 MFSD8-216ENST00000641147 4009 ntBASIC8.15□□□□□ -1.11
CLIP1P30622 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC8.15□□□□□ -1.11
CLIP1P30622 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
CLIP1P30622 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC8.14□□□□□ -1.11
CLIP1P30622 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP1P30622 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP1P30622 RNA5SP223-201ENST00000365174 120 ntBASIC8.14□□□□□ -1.11
CLIP1P30622 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC8.14□□□□□ -1.11
CLIP1P30622 AC245028.1-201ENST00000423259 256 ntBASIC8.14□□□□□ -1.11
CLIP1P30622 USP9YP9-201ENST00000429406 715 ntBASIC8.14□□□□□ -1.11
CLIP1P30622 RPL7P11-201ENST00000437586 658 ntBASIC8.14□□□□□ -1.11
CLIP1P30622 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC8.14□□□□□ -1.11
CLIP1P30622 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC8.14□□□□□ -1.11
CLIP1P30622 RPL7P16-201ENST00000479738 738 ntBASIC8.14□□□□□ -1.11
CLIP1P30622 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC8.14□□□□□ -1.11
CLIP1P30622 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC8.14□□□□□ -1.11
CLIP1P30622 AL671862.1-201ENST00000515851 349 ntBASIC8.14□□□□□ -1.11
CLIP1P30622 RNU4ATAC18P-201ENST00000516179 126 ntBASIC8.14□□□□□ -1.11
CLIP1P30622 GSTP1P1-201ENST00000548078 319 ntBASIC8.14□□□□□ -1.11
CLIP1P30622 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC8.14□□□□□ -1.11
CLIP1P30622 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC8.14□□□□□ -1.11
CLIP1P30622 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC8.14□□□□□ -1.11
CLIP1P30622 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP1P30622 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CLIP1P30622 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP1P30622 ABCC13-202ENST00000463099 3842 ntBASIC8.14□□□□□ -1.11
CLIP1P30622 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC8.14□□□□□ -1.11
CLIP1P30622 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP1P30622 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP1P30622 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CLIP1P30622 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CLIP1P30622 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
CLIP1P30622 AL590139.1-201ENST00000416267 400 ntBASIC8.13□□□□□ -1.11
CLIP1P30622 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC8.13□□□□□ -1.11
CLIP1P30622 ELOCP3-201ENST00000439303 348 ntBASIC8.13□□□□□ -1.11
CLIP1P30622 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC8.13□□□□□ -1.11
CLIP1P30622 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC8.13□□□□□ -1.11
CLIP1P30622 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC8.13□□□□□ -1.11
CLIP1P30622 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
CLIP1P30622 AC234771.5-201ENST00000600161 514 ntBASIC8.13□□□□□ -1.11
CLIP1P30622 AC073575.2-201ENST00000614212 627 ntBASIC8.13□□□□□ -1.11
CLIP1P30622 AL356752.1-201ENST00000615844 593 ntBASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms