Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC002553.2-201ENST00000453217 340 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPN6P29350 HSPE1P22-201ENST00000456856 327 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.18□□□□□ -1.58
PTPN6P29350 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN6P29350 AC016559.2-201ENST00000510759 359 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 AC074087.1-201ENST00000512059 724 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.18□□□□□ -1.58
PTPN6P29350 AC098976.1-201ENST00000513014 541 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.18□□□□□ -1.58
PTPN6P29350 RPS27AP18-201ENST00000515536 459 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPN6P29350 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN6P29350 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN6P29350 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPN6P29350 AC022404.1-201ENST00000555320 273 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 AC040958.1-201ENST00000561102 201 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPN6P29350 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.18□□□□□ -1.58
PTPN6P29350 MTCYBP13-201ENST00000578634 1093 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN6P29350 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN6P29350 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.18□□□□□ -1.58
PTPN6P29350 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.18□□□□□ -1.58
PTPN6P29350 AC002069.2-201ENST00000603580 883 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 AC138473.1-201ENST00000605717 526 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPN6P29350 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.18□□□□□ -1.58
PTPN6P29350 CU639417.4-201ENST00000623928 207 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
PTPN6P29350 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 YES1P1-201ENST00000418510 1628 ntBASIC5.18□□□□□ -1.58
PTPN6P29350 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PTPN6P29350 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN6P29350 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN6P29350 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN6P29350 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN6P29350 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN6P29350 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
PTPN6P29350 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN6P29350 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.17□□□□□ -1.58
PTPN6P29350 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN6P29350 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN6P29350 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN6P29350 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN6P29350 U3.7-201ENST00000363668 216 ntBASIC5.17□□□□□ -1.58
PTPN6P29350 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.17□□□□□ -1.58
PTPN6P29350 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PTPN6P29350 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN6P29350 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.17□□□□□ -1.58
PTPN6P29350 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN6P29350 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN6P29350 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPN6P29350 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PTPN6P29350 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN6P29350 RN7SL72P-201ENST00000460697 269 ntBASIC5.17□□□□□ -1.58
PTPN6P29350 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPN6P29350 RPSAP39-201ENST00000467439 883 ntBASIC5.17□□□□□ -1.58
PTPN6P29350 AC147055.1-201ENST00000509261 750 ntBASIC5.17□□□□□ -1.58
PTPN6P29350 IMPA1P1-201ENST00000510718 842 ntBASIC5.17□□□□□ -1.58
PTPN6P29350 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN6P29350 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPN6P29350 OR8G3P-201ENST00000533406 921 ntBASIC5.17□□□□□ -1.58
PTPN6P29350 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PTPN6P29350 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPN6P29350 AL049872.1-201ENST00000556323 322 ntBASIC5.17□□□□□ -1.58
PTPN6P29350 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN6P29350 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPN6P29350 FO393422.1-201ENST00000603908 708 ntBASIC5.17□□□□□ -1.58
PTPN6P29350 FAM72A-208ENST00000607379 1139 ntBASIC5.17□□□□□ -1.58
PTPN6P29350 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.17□□□□□ -1.58
PTPN6P29350 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN6P29350 OR7M1P-201ENST00000608946 533 ntBASIC5.17□□□□□ -1.58
PTPN6P29350 BX323046.1-201ENST00000610145 535 ntBASIC5.17□□□□□ -1.58
PTPN6P29350 MIR6768-201ENST00000610734 72 ntBASIC5.17□□□□□ -1.58
PTPN6P29350 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPN6P29350 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.17□□□□□ -1.58
PTPN6P29350 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN6P29350 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN6P29350 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN6P29350 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN6P29350 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.17□□□□□ -1.58
PTPN6P29350 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.17□□□□□ -1.58
PTPN6P29350 MTCO1P11-201ENST00000429111 1528 ntBASIC5.17□□□□□ -1.58
PTPN6P29350 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.17□□□□□ -1.58
PTPN6P29350 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTPN6P29350 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN6P29350 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN6P29350 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN6P29350 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN6P29350 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms