Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC7.85□□□□□ -1.15
RXRBP28702 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
RXRBP28702 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
RXRBP28702 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
RXRBP28702 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RXRBP28702 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
RXRBP28702 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RXRBP28702 AC099786.3-201ENST00000565735 1410 ntBASIC7.85□□□□□ -1.15
RXRBP28702 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
RXRBP28702 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.85□□□□□ -1.15
RXRBP28702 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
RXRBP28702 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
RXRBP28702 AC022905.1-201ENST00000503430 3048 ntBASIC7.84□□□□□ -1.15
RXRBP28702 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
RXRBP28702 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
RXRBP28702 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RXRBP28702 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.84□□□□□ -1.15
RXRBP28702 LINC02035-201ENST00000610128 5476 ntBASIC7.84□□□□□ -1.15
RXRBP28702 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.84□□□□□ -1.15
RXRBP28702 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.84□□□□□ -1.15
RXRBP28702 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.84□□□□□ -1.15
RXRBP28702 RNU1-32P-201ENST00000363937 159 ntBASIC7.84□□□□□ -1.15
RXRBP28702 MIR192-201ENST00000384915 110 ntBASIC7.84□□□□□ -1.15
RXRBP28702 AL023284.3-201ENST00000407767 334 ntBASIC7.84□□□□□ -1.15
RXRBP28702 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.84□□□□□ -1.15
RXRBP28702 LINC01881-201ENST00000416103 412 ntBASIC7.84□□□□□ -1.15
RXRBP28702 AC093162.1-201ENST00000419682 124 ntBASIC7.84□□□□□ -1.15
RXRBP28702 AL133173.1-201ENST00000423458 397 ntBASIC7.84□□□□□ -1.15
RXRBP28702 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC7.84□□□□□ -1.15
RXRBP28702 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.84□□□□□ -1.15
RXRBP28702 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC7.84□□□□□ -1.15
RXRBP28702 PRPF38AP2-201ENST00000438179 851 ntBASIC7.84□□□□□ -1.15
RXRBP28702 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC7.84□□□□□ -1.15
RXRBP28702 NDUFAF4P4-201ENST00000454883 502 ntBASIC7.84□□□□□ -1.15
RXRBP28702 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC7.84□□□□□ -1.15
RXRBP28702 SSX8-201ENST00000506270 579 ntBASIC7.84□□□□□ -1.15
RXRBP28702 AC113420.1-201ENST00000507903 571 ntBASIC7.84□□□□□ -1.15
RXRBP28702 AC008549.1-201ENST00000512900 643 ntBASIC7.84□□□□□ -1.15
RXRBP28702 MRPS33P3-201ENST00000513456 322 ntBASIC7.84□□□□□ -1.15
RXRBP28702 SCARNA6.1-201ENST00000516989 238 ntBASIC7.84□□□□□ -1.15
RXRBP28702 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RXRBP28702 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RXRBP28702 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
RXRBP28702 TOMM20P2-201ENST00000540082 421 ntBASIC7.84□□□□□ -1.15
RXRBP28702 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.84□□□□□ -1.15
RXRBP28702 AC092375.1-201ENST00000550410 637 ntBASIC7.84□□□□□ -1.15
RXRBP28702 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.84□□□□□ -1.15
RXRBP28702 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC7.84□□□□□ -1.15
RXRBP28702 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
RXRBP28702 BNIP3P22-201ENST00000593399 556 ntBASIC7.84□□□□□ -1.15
RXRBP28702 AP003465.2-201ENST00000602571 373 ntBASIC7.84□□□□□ -1.15
RXRBP28702 AC008745.1-201ENST00000604064 271 ntBASIC7.84□□□□□ -1.15
RXRBP28702 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RXRBP28702 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.15
RXRBP28702 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
RXRBP28702 AL390318.1-201ENST00000624564 687 ntBASIC7.84□□□□□ -1.15
RXRBP28702 AC007671.2-201ENST00000637344 619 ntBASIC7.84□□□□□ -1.15
RXRBP28702 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.84□□□□□ -1.15
RXRBP28702 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.84□□□□□ -1.15
RXRBP28702 AC104162.1-201ENST00000430831 2382 ntBASIC7.84□□□□□ -1.15
RXRBP28702 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
RXRBP28702 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC7.83□□□□□ -1.16
RXRBP28702 ZNF812P-201ENST00000457674 1694 ntBASIC7.83□□□□□ -1.16
RXRBP28702 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
RXRBP28702 RNU4-75P-201ENST00000364621 146 ntBASIC7.83□□□□□ -1.16
RXRBP28702 AL445213.1-201ENST00000412589 747 ntBASIC7.83□□□□□ -1.16
RXRBP28702 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 AC104837.2-201ENST00000427236 424 ntBASIC7.83□□□□□ -1.16
RXRBP28702 RPS27AP6-201ENST00000427962 448 ntBASIC7.83□□□□□ -1.16
RXRBP28702 C8orf59P1-201ENST00000429930 303 ntBASIC7.83□□□□□ -1.16
RXRBP28702 AC016712.1-201ENST00000431088 378 ntBASIC7.83□□□□□ -1.16
RXRBP28702 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC7.83□□□□□ -1.16
RXRBP28702 ATG12P2-201ENST00000456830 416 ntBASIC7.83□□□□□ -1.16
RXRBP28702 RPS3AP41-201ENST00000462701 778 ntBASIC7.83□□□□□ -1.16
RXRBP28702 RN7SL459P-201ENST00000481078 302 ntBASIC7.83□□□□□ -1.16
RXRBP28702 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC7.83□□□□□ -1.16
RXRBP28702 PPM1AP1-201ENST00000502740 1135 ntBASIC7.83□□□□□ -1.16
RXRBP28702 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.83□□□□□ -1.16
RXRBP28702 OR5AZ1P-201ENST00000527448 943 ntBASIC7.83□□□□□ -1.16
RXRBP28702 AC130364.2-201ENST00000528639 604 ntBASIC7.83□□□□□ -1.16
RXRBP28702 AC022880.1-201ENST00000534017 973 ntBASIC7.83□□□□□ -1.16
RXRBP28702 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 AC063949.1-201ENST00000552900 865 ntBASIC7.83□□□□□ -1.16
RXRBP28702 OR11J2P-201ENST00000555298 907 ntBASIC7.83□□□□□ -1.16
RXRBP28702 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC7.83□□□□□ -1.16
RXRBP28702 ATP5J2P6-201ENST00000565203 266 ntBASIC7.83□□□□□ -1.16
RXRBP28702 OOSP1P2-201ENST00000579644 351 ntBASIC7.83□□□□□ -1.16
RXRBP28702 AL133243.1-201ENST00000614487 366 ntBASIC7.83□□□□□ -1.16
RXRBP28702 AL158062.1-201ENST00000619632 745 ntBASIC7.83□□□□□ -1.16
RXRBP28702 AC012414.7-202ENST00000622705 1090 ntBASIC7.83□□□□□ -1.16
RXRBP28702 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.83□□□□□ -1.16
RXRBP28702 OR8B1P-202ENST00000641132 1178 ntBASIC7.83□□□□□ -1.16
RXRBP28702 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RXRBP28702 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms