Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL5A1P20908 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.02□□□□□ -1.61
COL5A1P20908 AL359955.1-201ENST00000455242 3275 ntBASIC5.02□□□□□ -1.61
COL5A1P20908 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL5A1P20908 AC132825.1-201ENST00000463573 2247 ntBASIC5.02□□□□□ -1.61
COL5A1P20908 RPL10P10-201ENST00000403509 664 ntBASIC5.02□□□□□ -1.61
COL5A1P20908 RN7SKP100-201ENST00000411258 284 ntBASIC5.02□□□□□ -1.61
COL5A1P20908 GJA6P-201ENST00000415117 1042 ntBASIC5.02□□□□□ -1.61
COL5A1P20908 CNOT7P1-201ENST00000429006 852 ntBASIC5.02□□□□□ -1.61
COL5A1P20908 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.02□□□□□ -1.61
COL5A1P20908 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.02□□□□□ -1.61
COL5A1P20908 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.02□□□□□ -1.61
COL5A1P20908 RN7SL604P-201ENST00000492589 296 ntBASIC5.02□□□□□ -1.61
COL5A1P20908 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.02□□□□□ -1.61
COL5A1P20908 SLC25A15P5-201ENST00000508033 253 ntBASIC5.02□□□□□ -1.61
COL5A1P20908 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.02□□□□□ -1.61
COL5A1P20908 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.02□□□□□ -1.61
COL5A1P20908 AL110118.1-201ENST00000553543 400 ntBASIC5.02□□□□□ -1.61
COL5A1P20908 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.02□□□□□ -1.61
COL5A1P20908 AC008814.1-201ENST00000603797 406 ntBASIC5.02□□□□□ -1.61
COL5A1P20908 AC010632.3-201ENST00000611377 369 ntBASIC5.02□□□□□ -1.61
COL5A1P20908 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.01□□□□□ -1.61
COL5A1P20908 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COL5A1P20908 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.01□□□□□ -1.61
COL5A1P20908 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.01□□□□□ -1.61
COL5A1P20908 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.01□□□□□ -1.61
COL5A1P20908 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.01□□□□□ -1.61
COL5A1P20908 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
COL5A1P20908 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 RNA5SP113-201ENST00000410486 84 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.01□□□□□ -1.61
COL5A1P20908 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.01□□□□□ -1.61
COL5A1P20908 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 AC012512.1-201ENST00000446594 718 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.01□□□□□ -1.61
COL5A1P20908 SNORA70.11-201ENST00000515987 138 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 SNORA70.13-201ENST00000516116 138 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 RNA5SP43-201ENST00000516559 110 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.01□□□□□ -1.61
COL5A1P20908 AC012400.1-201ENST00000518452 381 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
COL5A1P20908 AC008033.2-201ENST00000542626 177 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.01□□□□□ -1.61
COL5A1P20908 AC084824.2-201ENST00000548906 345 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.01□□□□□ -1.61
COL5A1P20908 AC091042.1-201ENST00000579213 173 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.01□□□□□ -1.61
COL5A1P20908 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.01□□□□□ -1.61
COL5A1P20908 AC009027.1-201ENST00000604510 479 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 AL138960.1-201ENST00000613838 513 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.01□□□□□ -1.61
COL5A1P20908 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
COL5A1P20908 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.01□□□□□ -1.61
COL5A1P20908 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.01□□□□□ -1.61
COL5A1P20908 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 AC010168.2-201ENST00000562691 5428 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 MAPK10-270ENST00000641102 3538 ntBASIC5.01□□□□□ -1.61
COL5A1P20908 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
COL5A1P20908 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.01□□□□□ -1.61
COL5A1P20908 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.01□□□□□ -1.61
COL5A1P20908 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL5A1P20908 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL5A1P20908 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5□□□□□ -1.61
COL5A1P20908 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
COL5A1P20908 HMGB3P7-201ENST00000400214 611 ntBASIC5□□□□□ -1.61
COL5A1P20908 RPS21P8-201ENST00000413365 247 ntBASIC5□□□□□ -1.61
COL5A1P20908 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5□□□□□ -1.61
COL5A1P20908 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL5A1P20908 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5□□□□□ -1.61
COL5A1P20908 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5□□□□□ -1.61
COL5A1P20908 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5□□□□□ -1.61
COL5A1P20908 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5□□□□□ -1.61
COL5A1P20908 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5□□□□□ -1.61
COL5A1P20908 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5□□□□□ -1.61
COL5A1P20908 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5□□□□□ -1.61
COL5A1P20908 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5□□□□□ -1.61
COL5A1P20908 AC136624.4-201ENST00000573044 370 ntBASIC5□□□□□ -1.61
COL5A1P20908 MIR3667-201ENST00000581025 74 ntBASIC5□□□□□ -1.61
COL5A1P20908 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL5A1P20908 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL5A1P20908 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL5A1P20908 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL5A1P20908 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL5A1P20908 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5□□□□□ -1.61
COL5A1P20908 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL5A1P20908 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL5A1P20908 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5□□□□□ -1.61
COL5A1P20908 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms