Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AC013470.3-201ENST00000420252 1194 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 RPL12P17-201ENST00000432393 498 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AC019185.1-201ENST00000442718 389 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 MED28P3-201ENST00000444288 531 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 RPS27AP2-201ENST00000457576 465 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AC093815.1-201ENST00000508637 280 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AC117525.1-201ENST00000515228 503 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AC097486.1-201ENST00000515331 210 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 MIR1273E-201ENST00000581165 102 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AC019131.2-201ENST00000609071 870 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AL121890.2-201ENST00000617644 465 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AC021106.3-201ENST00000623925 531 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 SAMMSON-209ENST00000641222 1100 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.53□□□□□ -1.52
HLA-DPA1P20036 ABCC13-202ENST00000463099 3842 ntBASIC5.53□□□□□ -1.52
HLA-DPA1P20036 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 Z95331.1-201ENST00000623075 23112 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 RNU6-1251P-201ENST00000364502 107 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 MIR323B-201ENST00000385269 82 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 RN7SKP293-201ENST00000411389 296 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 Z93019.1-201ENST00000416450 973 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 CHEK2P5-201ENST00000423877 246 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 NPM1P26-201ENST00000426339 738 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AP000281.1-201ENST00000444036 316 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AC073909.1-201ENST00000447112 999 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 BUD31P2-201ENST00000449374 300 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AC002553.2-201ENST00000453217 340 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 RPSAP39-201ENST00000467439 883 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 STRADBP1-201ENST00000478954 1281 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 MTND6P2-201ENST00000512226 524 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AP002373.2-201ENST00000541631 1060 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AC015720.2-201ENST00000567709 334 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 FO393422.1-201ENST00000603908 708 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 MIR6862-1-201ENST00000613016 70 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 MIR6862-2-201ENST00000614755 70 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AC132068.1-201ENST00000623805 459 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AL691477.1-201ENST00000624398 162 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AC073869.8-201ENST00000641806 335 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 AC027228.2-201ENST00000567141 2154 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HLA-DPA1P20036 UGT2B26P-201ENST00000508672 1613 ntBASIC5.52□□□□□ -1.53
HLA-DPA1P20036 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.51□□□□□ -1.53
HLA-DPA1P20036 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DPA1P20036 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms