Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
ERCC3P19447 FAM3C2-201ENST00000312214 681 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC7.52□□□□□ -1.21
ERCC3P19447 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
ERCC3P19447 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC3P19447 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.52□□□□□ -1.21
ERCC3P19447 AC093719.1-202ENST00000392735 373 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 HNRNPDP2-201ENST00000406475 478 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 SNORA77.2-201ENST00000408571 112 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC7.52□□□□□ -1.21
ERCC3P19447 MTND1P32-201ENST00000433043 938 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC7.52□□□□□ -1.21
ERCC3P19447 AL354941.1-201ENST00000438600 464 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 MTCYBP34-201ENST00000439552 670 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 MTND3P1-201ENST00000441336 220 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 RPL5P7-201ENST00000444235 813 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 HMGB1P16-201ENST00000447155 540 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.52□□□□□ -1.21
ERCC3P19447 AC091544.1-201ENST00000484702 348 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 LINC00888-204ENST00000487386 421 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 AC026826.1-201ENST00000493002 361 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 RPL5P14-201ENST00000494197 878 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 CCDC11P1-201ENST00000503137 1162 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 AC116353.3-201ENST00000511215 249 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.52□□□□□ -1.21
ERCC3P19447 IGJP1-201ENST00000522682 475 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 OR8A2P-201ENST00000528631 952 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC3P19447 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.52□□□□□ -1.21
ERCC3P19447 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC3P19447 RN7SL208P-201ENST00000577964 296 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC7.52□□□□□ -1.21
ERCC3P19447 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.52□□□□□ -1.21
ERCC3P19447 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.52□□□□□ -1.21
ERCC3P19447 AC018692.2-201ENST00000624130 348 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC3P19447 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.52□□□□□ -1.21
ERCC3P19447 AC093311.1-201ENST00000506586 2021 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 ELL2P3-201ENST00000457883 1602 ntBASIC7.52□□□□□ -1.21
ERCC3P19447 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC3P19447 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.52□□□□□ -1.21
ERCC3P19447 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC3P19447 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC3P19447 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
ERCC3P19447 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
ERCC3P19447 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 CLCA3P-203ENST00000490028 2781 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 RNU6-707P-201ENST00000364647 95 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 ATP5F1P3-201ENST00000397213 657 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC3P19447 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC3P19447 SEPT2P1-201ENST00000419651 180 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 ZNF885P-201ENST00000420174 1098 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 DEFA9P-201ENST00000433042 285 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC7.51□□□□□ -1.21
ERCC3P19447 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC7.51□□□□□ -1.21
ERCC3P19447 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC3P19447 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC3P19447 AMYP1-201ENST00000440059 1023 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 RPL23AP76-201ENST00000441860 458 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC3P19447 TPTE2P6-202ENST00000445572 1007 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 AC128716.1-201ENST00000475129 166 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 AC090114.3-201ENST00000479267 829 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC3P19447 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC3P19447 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC3P19447 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC3P19447 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC3P19447 HMGB1P42-201ENST00000532126 553 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 AC092865.1-201ENST00000544395 1023 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 AC008055.1-201ENST00000547032 609 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC7.51□□□□□ -1.21
ERCC3P19447 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC3P19447 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC3P19447 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC3P19447 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC3P19447 AC106785.4-201ENST00000569492 412 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 AC004232.1-201ENST00000571388 208 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 SNORA70D-201ENST00000578836 135 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.51□□□□□ -1.21
ERCC3P19447 AL163642.2-201ENST00000604722 1019 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 OR2AS2P-201ENST00000606902 342 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 AC055764.2-201ENST00000610089 670 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 AC010333.3-201ENST00000615100 402 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.51□□□□□ -1.21
ERCC3P19447 LINC02495-203ENST00000636704 242 ntBASIC7.51□□□□□ -1.21
ERCC3P19447 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC7.51□□□□□ -1.21
ERCC3P19447 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
ERCC3P19447 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
ERCC3P19447 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms