Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ATF3P18847 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
ATF3P18847 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
ATF3P18847 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
ATF3P18847 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
ATF3P18847 AL078621.3-201ENST00000623707 2042 ntBASIC7.44□□□□□ -1.22
ATF3P18847 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.44□□□□□ -1.22
ATF3P18847 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
ATF3P18847 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ATF3P18847 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ATF3P18847 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.44□□□□□ -1.22
ATF3P18847 RNU6-152P-201ENST00000384037 107 ntBASIC7.44□□□□□ -1.22
ATF3P18847 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.44□□□□□ -1.22
ATF3P18847 AC017078.1-201ENST00000416146 368 ntBASIC7.44□□□□□ -1.22
ATF3P18847 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.44□□□□□ -1.22
ATF3P18847 AC012497.1-201ENST00000429392 575 ntBASIC7.44□□□□□ -1.22
ATF3P18847 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.44□□□□□ -1.22
ATF3P18847 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
ATF3P18847 MIR3908-201ENST00000579798 126 ntBASIC7.44□□□□□ -1.22
ATF3P18847 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC7.44□□□□□ -1.22
ATF3P18847 MIR6780A-201ENST00000615089 68 ntBASIC7.44□□□□□ -1.22
ATF3P18847 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.44□□□□□ -1.22
ATF3P18847 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
ATF3P18847 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ATF3P18847 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.44□□□□□ -1.22
ATF3P18847 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
ATF3P18847 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.43□□□□□ -1.22
ATF3P18847 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ATF3P18847 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ATF3P18847 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ATF3P18847 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ATF3P18847 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ATF3P18847 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.43□□□□□ -1.22
ATF3P18847 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.43□□□□□ -1.22
ATF3P18847 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.43□□□□□ -1.22
ATF3P18847 AC079741.1-201ENST00000321498 212 ntBASIC7.43□□□□□ -1.22
ATF3P18847 HSPA8P15-201ENST00000401676 786 ntBASIC7.43□□□□□ -1.22
ATF3P18847 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
ATF3P18847 AC092570.3-201ENST00000420113 693 ntBASIC7.43□□□□□ -1.22
ATF3P18847 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC7.43□□□□□ -1.22
ATF3P18847 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC7.43□□□□□ -1.22
ATF3P18847 NFU1-207ENST00000462320 558 ntTSL 4 BASIC7.43□□□□□ -1.22
ATF3P18847 RPL23AP72-201ENST00000492447 435 ntBASIC7.43□□□□□ -1.22
ATF3P18847 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7.43□□□□□ -1.22
ATF3P18847 TOMM22P4-201ENST00000511318 336 ntBASIC7.43□□□□□ -1.22
ATF3P18847 AC020937.1-201ENST00000519677 1013 ntBASIC7.43□□□□□ -1.22
ATF3P18847 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC7.43□□□□□ -1.22
ATF3P18847 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ATF3P18847 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.43□□□□□ -1.22
ATF3P18847 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC7.43□□□□□ -1.22
ATF3P18847 MIR4691-201ENST00000583764 85 ntBASIC7.43□□□□□ -1.22
ATF3P18847 AC245389.2-201ENST00000616023 576 ntBASIC7.43□□□□□ -1.22
ATF3P18847 AC242843.1-201ENST00000618702 573 ntBASIC7.43□□□□□ -1.22
ATF3P18847 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC7.43□□□□□ -1.22
ATF3P18847 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
ATF3P18847 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.43□□□□□ -1.22
ATF3P18847 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
ATF3P18847 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7.43□□□□□ -1.22
ATF3P18847 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.43□□□□□ -1.22
ATF3P18847 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
ATF3P18847 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ATF3P18847 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
ATF3P18847 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.42□□□□□ -1.22
ATF3P18847 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ATF3P18847 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.42□□□□□ -1.22
ATF3P18847 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ATF3P18847 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.42□□□□□ -1.22
ATF3P18847 AL731532.1-201ENST00000623972 4236 ntBASIC7.42□□□□□ -1.22
ATF3P18847 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC7.42□□□□□ -1.22
ATF3P18847 SNORA70.2-201ENST00000364506 135 ntBASIC7.42□□□□□ -1.22
ATF3P18847 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
ATF3P18847 OR1F12-201ENST00000402365 945 ntBASIC7.42□□□□□ -1.22
ATF3P18847 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.42□□□□□ -1.22
ATF3P18847 AL356968.2-201ENST00000412769 1257 ntBASIC7.42□□□□□ -1.22
ATF3P18847 CBX1P3-201ENST00000413296 527 ntBASIC7.42□□□□□ -1.22
ATF3P18847 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
ATF3P18847 DDX39BP1-205ENST00000422507 192 ntBASIC7.42□□□□□ -1.22
ATF3P18847 AL356806.1-201ENST00000422524 916 ntBASIC7.42□□□□□ -1.22
ATF3P18847 ZFAND6P1-201ENST00000434138 605 ntBASIC7.42□□□□□ -1.22
ATF3P18847 MTCO3P43-201ENST00000440974 771 ntBASIC7.42□□□□□ -1.22
ATF3P18847 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC7.42□□□□□ -1.22
ATF3P18847 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ATF3P18847 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC7.42□□□□□ -1.22
ATF3P18847 RPS23P7-201ENST00000466210 444 ntBASIC7.42□□□□□ -1.22
ATF3P18847 AC007537.2-201ENST00000472093 511 ntBASIC7.42□□□□□ -1.22
ATF3P18847 AC022336.1-201ENST00000475510 337 ntBASIC7.42□□□□□ -1.22
ATF3P18847 TRBV5-2-201ENST00000489095 273 ntBASIC7.42□□□□□ -1.22
ATF3P18847 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
ATF3P18847 BTF3P13-201ENST00000513224 490 ntBASIC7.42□□□□□ -1.22
ATF3P18847 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.42□□□□□ -1.22
ATF3P18847 RN7SKP253-201ENST00000516424 309 ntBASIC7.42□□□□□ -1.22
ATF3P18847 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC7.42□□□□□ -1.22
ATF3P18847 PARP1P2-201ENST00000556806 195 ntBASIC7.42□□□□□ -1.22
ATF3P18847 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ATF3P18847 AC073111.2-201ENST00000605657 1075 ntBASIC7.42□□□□□ -1.22
ATF3P18847 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
ATF3P18847 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
ATF3P18847 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
ATF3P18847 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
ATF3P18847 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms