Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.59□□□□□ -1.67
CTLA4P16410 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CTLA4P16410 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CTLA4P16410 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTLA4P16410 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTLA4P16410 RNA5SP132-201ENST00000364725 118 ntBASIC4.59□□□□□ -1.67
CTLA4P16410 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTLA4P16410 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTLA4P16410 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CTLA4P16410 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.59□□□□□ -1.67
CTLA4P16410 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.59□□□□□ -1.67
CTLA4P16410 EI24P4-201ENST00000423683 1078 ntBASIC4.59□□□□□ -1.67
CTLA4P16410 HMGN2P27-201ENST00000427352 270 ntBASIC4.59□□□□□ -1.67
CTLA4P16410 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.59□□□□□ -1.67
CTLA4P16410 AC009238.2-201ENST00000431026 355 ntBASIC4.59□□□□□ -1.67
CTLA4P16410 TCEA1P3-201ENST00000443005 880 ntBASIC4.59□□□□□ -1.67
CTLA4P16410 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CTLA4P16410 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.59□□□□□ -1.67
CTLA4P16410 AC015864.1-201ENST00000496512 544 ntBASIC4.59□□□□□ -1.67
CTLA4P16410 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTLA4P16410 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.59□□□□□ -1.67
CTLA4P16410 AC026782.2-201ENST00000510845 636 ntBASIC4.59□□□□□ -1.67
CTLA4P16410 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.59□□□□□ -1.67
CTLA4P16410 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.59□□□□□ -1.67
CTLA4P16410 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.59□□□□□ -1.67
CTLA4P16410 AC021733.2-201ENST00000518830 497 ntBASIC4.59□□□□□ -1.67
CTLA4P16410 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.59□□□□□ -1.67
CTLA4P16410 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.59□□□□□ -1.67
CTLA4P16410 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.59□□□□□ -1.67
CTLA4P16410 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.59□□□□□ -1.67
CTLA4P16410 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTLA4P16410 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CTLA4P16410 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.59□□□□□ -1.67
CTLA4P16410 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.59□□□□□ -1.67
CTLA4P16410 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
CTLA4P16410 AC069307.1-201ENST00000602820 447 ntBASIC4.59□□□□□ -1.67
CTLA4P16410 AC109309.2-201ENST00000612597 332 ntBASIC4.59□□□□□ -1.67
CTLA4P16410 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.59□□□□□ -1.67
CTLA4P16410 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CTLA4P16410 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CTLA4P16410 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
CTLA4P16410 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
CTLA4P16410 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.59□□□□□ -1.68
CTLA4P16410 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CTLA4P16410 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTLA4P16410 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 AC020633.1-201ENST00000468439 2247 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 AC133552.1-201ENST00000569988 4007 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.58□□□□□ -1.68
CTLA4P16410 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.58□□□□□ -1.68
CTLA4P16410 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
CTLA4P16410 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CTLA4P16410 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
CTLA4P16410 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CTLA4P16410 AC235565.1-201ENST00000456962 1325 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CTLA4P16410 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTLA4P16410 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CTLA4P16410 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 SNORA67-201ENST00000384423 137 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 AL035079.1-201ENST00000405210 287 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 U3.32-201ENST00000408116 212 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.58□□□□□ -1.68
CTLA4P16410 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 REREP1Y-201ENST00000422655 198 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 AC093655.2-201ENST00000425735 631 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 REREP2Y-201ENST00000439103 200 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.58□□□□□ -1.68
CTLA4P16410 CYCSP24-201ENST00000445119 316 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 Z92846.1-201ENST00000456203 268 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.58□□□□□ -1.68
CTLA4P16410 AC020779.1-201ENST00000478757 796 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 AC005412.2-201ENST00000492004 341 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 NPM1P28-201ENST00000492269 840 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 EIF3LP3-201ENST00000495197 822 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 AC104109.1-201ENST00000498563 436 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 RPS4XP20-201ENST00000505751 772 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 ASNSP4-201ENST00000511103 447 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.58□□□□□ -1.68
CTLA4P16410 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.58□□□□□ -1.68
CTLA4P16410 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.58□□□□□ -1.68
CTLA4P16410 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTLA4P16410 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTLA4P16410 AC127381.1-201ENST00000555979 939 ntBASIC4.58□□□□□ -1.68
CTLA4P16410 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTLA4P16410 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CTLA4P16410 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.58□□□□□ -1.68
CTLA4P16410 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
CTLA4P16410 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.58□□□□□ -1.68
CTLA4P16410 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC4.58□□□□□ -1.68
CTLA4P16410 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.58□□□□□ -1.68
CTLA4P16410 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.58□□□□□ -1.68
CTLA4P16410 AC079395.2-201ENST00000610982 737 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms