Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC007204.2-201ENST00000615022 616 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 MIR6826-201ENST00000617808 98 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 MIR8080-201ENST00000622224 89 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 AC135068.5-201ENST00000624197 983 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFRAP16234 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFRAP16234 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFRAP16234 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PDGFRAP16234 AL353796.1-201ENST00000561542 3241 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 AC092451.3-201ENST00000625067 1343 ntBASIC5.7□□□□□ -1.5
PDGFRAP16234 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFRAP16234 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFRAP16234 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
PDGFRAP16234 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFRAP16234 AC093671.1-201ENST00000624981 2929 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 AC016745.2-201ENST00000608834 3443 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.69□□□□□ -1.5
PDGFRAP16234 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFRAP16234 AC019072.1-201ENST00000604535 1551 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.69□□□□□ -1.5
PDGFRAP16234 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFRAP16234 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.69□□□□□ -1.5
PDGFRAP16234 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDGFRAP16234 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.69□□□□□ -1.5
PDGFRAP16234 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFRAP16234 YY1P1-201ENST00000427625 668 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 RPL12P17-201ENST00000432393 498 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.69□□□□□ -1.5
PDGFRAP16234 RPL31P53-201ENST00000457065 348 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 RPS26P39-201ENST00000469206 341 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.69□□□□□ -1.5
PDGFRAP16234 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
PDGFRAP16234 AC097486.1-201ENST00000515331 210 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 SNORA70.11-201ENST00000515987 138 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 SNORA70.13-201ENST00000516116 138 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 SCARNA21.2-201ENST00000516600 166 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFRAP16234 IGKV2-18-201ENST00000522607 343 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.69□□□□□ -1.5
PDGFRAP16234 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.69□□□□□ -1.5
PDGFRAP16234 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFRAP16234 MIR7853-201ENST00000584820 132 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.69□□□□□ -1.5
PDGFRAP16234 AC010245.2-201ENST00000606908 1167 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 AC010632.3-201ENST00000611377 369 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 AC008833.1-201ENST00000611633 691 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 AL512624.1-201ENST00000613638 469 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFRAP16234 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PDGFRAP16234 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PDGFRAP16234 OR10AB1P-202ENST00000641219 1686 ntBASIC5.69□□□□□ -1.5
PDGFRAP16234 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.69□□□□□ -1.5
PDGFRAP16234 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PDGFRAP16234 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFRAP16234 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.68□□□□□ -1.5
PDGFRAP16234 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDGFRAP16234 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
PDGFRAP16234 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFRAP16234 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFRAP16234 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDGFRAP16234 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFRAP16234 MIR365B-201ENST00000362317 111 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 RN7SKP162-201ENST00000363605 345 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PDGFRAP16234 MIR137-201ENST00000385223 102 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 NPM1P4-201ENST00000414095 812 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFRAP16234 SRSF1P1-201ENST00000424058 520 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 AJ239321.1-201ENST00000424255 564 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 RSL24D1P2-201ENST00000445584 366 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.68□□□□□ -1.5
PDGFRAP16234 AC105399.1-202ENST00000447303 205 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.68□□□□□ -1.5
PDGFRAP16234 AL672138.1-201ENST00000450604 1015 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 AL133445.1-201ENST00000467051 452 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 AC092754.1-201ENST00000472975 479 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 AC105918.1-201ENST00000474399 838 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 EIF1P7-201ENST00000487533 337 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.68□□□□□ -1.5
PDGFRAP16234 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.68□□□□□ -1.5
PDGFRAP16234 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.68□□□□□ -1.5
PDGFRAP16234 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFRAP16234 AP002981.1-201ENST00000517692 975 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.68□□□□□ -1.5
PDGFRAP16234 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFRAP16234 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.68□□□□□ -1.5
PDGFRAP16234 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFRAP16234 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.68□□□□□ -1.5
PDGFRAP16234 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.68□□□□□ -1.5
PDGFRAP16234 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.68□□□□□ -1.5
PDGFRAP16234 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFRAP16234 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.68□□□□□ -1.5
PDGFRAP16234 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PDGFRAP16234 MIR3176-201ENST00000582210 90 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.68□□□□□ -1.5
PDGFRAP16234 SUGT1P3-202ENST00000604259 383 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.68□□□□□ -1.5
PDGFRAP16234 AC016911.1-201ENST00000613297 452 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms