Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 OR5AK3P-201ENST00000527486 1297 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.28□□□□□ -1.4
COL6A2P12110 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.28□□□□□ -1.4
COL6A2P12110 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.28□□□□□ -1.4
COL6A2P12110 ELOCP32-201ENST00000548625 324 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.28□□□□□ -1.4
COL6A2P12110 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.28□□□□□ -1.4
COL6A2P12110 AC023968.1-201ENST00000560719 475 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 RBM22P12-201ENST00000567098 1255 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AC095057.3-201ENST00000567102 1157 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.28□□□□□ -1.4
COL6A2P12110 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.28□□□□□ -1.4
COL6A2P12110 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC6.28□□□□□ -1.4
COL6A2P12110 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.28□□□□□ -1.4
COL6A2P12110 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.28□□□□□ -1.4
COL6A2P12110 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.28□□□□□ -1.4
COL6A2P12110 RPL12P48-201ENST00000605620 304 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL6A2P12110 AC107075.1-201ENST00000613695 314 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL6A2P12110 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL6A2P12110 AP004607.9-201ENST00000618202 316 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 VN1R7P-201ENST00000619242 903 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.28□□□□□ -1.4
COL6A2P12110 AC010608.2-201ENST00000624830 470 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 AC092184.1-201ENST00000625042 715 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 LINC02495-203ENST00000636704 242 ntBASIC6.28□□□□□ -1.4
COL6A2P12110 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.28□□□□□ -1.4
COL6A2P12110 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL6A2P12110 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.28□□□□□ -1.4
COL6A2P12110 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL6A2P12110 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL6A2P12110 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
COL6A2P12110 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL6A2P12110 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
COL6A2P12110 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
COL6A2P12110 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 VN2R3P-201ENST00000422626 1412 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL6A2P12110 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL6A2P12110 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL6A2P12110 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 MIR142-201ENST00000384835 87 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
COL6A2P12110 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL6A2P12110 FABP12P1-201ENST00000401911 322 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AL079342.2-201ENST00000403367 482 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 RN7SKP281-201ENST00000410472 352 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.27□□□□□ -1.41
COL6A2P12110 RPS26P38-201ENST00000414476 348 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 TAF13P2-201ENST00000416876 286 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.27□□□□□ -1.41
COL6A2P12110 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC6.27□□□□□ -1.41
COL6A2P12110 AC245884.2-201ENST00000426257 404 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.27□□□□□ -1.41
COL6A2P12110 BX679664.2-201ENST00000439282 283 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.27□□□□□ -1.41
COL6A2P12110 AC092170.1-201ENST00000440211 356 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 YWHAZP2-201ENST00000440317 728 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 RPS10P14-201ENST00000440748 502 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC6.27□□□□□ -1.41
COL6A2P12110 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.27□□□□□ -1.41
COL6A2P12110 HMGB1P48-201ENST00000446155 598 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
COL6A2P12110 MTND2P19-201ENST00000449129 1012 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 NPM1P13-201ENST00000452663 865 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 HSPE1P22-201ENST00000456856 327 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 RPS3AP49-201ENST00000472161 790 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 SYPL1P1-201ENST00000473622 768 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 SNRPCP3-201ENST00000474888 476 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.27□□□□□ -1.41
COL6A2P12110 OR9A1P-202ENST00000484361 945 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 LINC00888-204ENST00000487386 421 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AC122714.1-201ENST00000502510 459 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.27□□□□□ -1.41
COL6A2P12110 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.27□□□□□ -1.41
COL6A2P12110 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.27□□□□□ -1.41
COL6A2P12110 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC6.27□□□□□ -1.41
COL6A2P12110 AC093325.1-201ENST00000508378 326 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 MTND3P5-201ENST00000512798 333 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 CYP4F27P-201ENST00000514557 494 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AC096661.1-201ENST00000515870 822 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 snoZ278.1-201ENST00000517059 112 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.27□□□□□ -1.41
COL6A2P12110 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 OR11H3P-201ENST00000554547 982 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AL391156.1-201ENST00000554965 554 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.27□□□□□ -1.41
COL6A2P12110 DUXAP1-201ENST00000556632 463 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 CYP2C60P-201ENST00000566088 139 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AC010287.1-201ENST00000566916 357 ntBASIC6.27□□□□□ -1.41
COL6A2P12110 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.27□□□□□ -1.41
COL6A2P12110 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 784.8 ms