Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.83□□□□□ -1
TOP2AP11388 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC8.83□□□□□ -1
TOP2AP11388 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC8.82□□□□□ -1
TOP2AP11388 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC8.82□□□□□ -1
TOP2AP11388 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TOP2AP11388 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TOP2AP11388 RPL32P3-201ENST00000359025 275 ntBASIC8.82□□□□□ -1
TOP2AP11388 FABP7P1-201ENST00000424004 391 ntBASIC8.82□□□□□ -1
TOP2AP11388 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC8.82□□□□□ -1
TOP2AP11388 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC8.82□□□□□ -1
TOP2AP11388 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC8.82□□□□□ -1
TOP2AP11388 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC8.82□□□□□ -1
TOP2AP11388 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC8.82□□□□□ -1
TOP2AP11388 AL592148.3-201ENST00000608771 2646 ntBASIC8.82□□□□□ -1
TOP2AP11388 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TOP2AP11388 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TOP2AP11388 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC8.82□□□□□ -1
TOP2AP11388 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC8.82□□□□□ -1
TOP2AP11388 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.82□□□□□ -1
TOP2AP11388 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
TOP2AP11388 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
TOP2AP11388 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TOP2AP11388 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC8.81□□□□□ -1
TOP2AP11388 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.81□□□□□ -1
TOP2AP11388 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC8.81□□□□□ -1
TOP2AP11388 NRBF2P3-201ENST00000432731 865 ntBASIC8.81□□□□□ -1
TOP2AP11388 RN7SL244P-201ENST00000493405 297 ntBASIC8.81□□□□□ -1
TOP2AP11388 OR2A3P-201ENST00000493774 953 ntBASIC8.81□□□□□ -1
TOP2AP11388 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC8.81□□□□□ -1
TOP2AP11388 AC025674.1-201ENST00000507074 324 ntBASIC8.81□□□□□ -1
TOP2AP11388 OR4A6P-201ENST00000534364 970 ntBASIC8.81□□□□□ -1
TOP2AP11388 FCF1-203ENST00000553615 954 ntTSL 3 BASIC8.81□□□□□ -1
TOP2AP11388 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
TOP2AP11388 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC8.81□□□□□ -1
TOP2AP11388 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
TOP2AP11388 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
TOP2AP11388 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC8.81□□□□□ -1
TOP2AP11388 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC8.81□□□□□ -1
TOP2AP11388 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC8.81□□□□□ -1
TOP2AP11388 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC8.81□□□□□ -1
TOP2AP11388 AC012213.2-201ENST00000562917 4597 ntBASIC8.81□□□□□ -1
TOP2AP11388 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC8.8□□□□□ -1
TOP2AP11388 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC8.8□□□□□ -1
TOP2AP11388 AL049693.1-201ENST00000402760 611 ntBASIC8.8□□□□□ -1
TOP2AP11388 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC8.8□□□□□ -1
TOP2AP11388 AC020898.1-201ENST00000474167 787 ntBASIC8.8□□□□□ -1
TOP2AP11388 AC022133.1-201ENST00000490961 571 ntBASIC8.8□□□□□ -1
TOP2AP11388 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC8.8□□□□□ -1
TOP2AP11388 AC233699.1-201ENST00000569955 1168 ntBASIC8.8□□□□□ -1
TOP2AP11388 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC8.8□□□□□ -1
TOP2AP11388 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC8.8□□□□□ -1
TOP2AP11388 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
TOP2AP11388 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
TOP2AP11388 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC8.8□□□□□ -1
TOP2AP11388 AC092681.1-201ENST00000297369 291 ntBASIC8.8□□□□□ -1
TOP2AP11388 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
TOP2AP11388 MIR129-1-201ENST00000384972 72 ntBASIC8.8□□□□□ -1
TOP2AP11388 RPL7AP49-201ENST00000429522 581 ntBASIC8.8□□□□□ -1
TOP2AP11388 AL591438.1-201ENST00000433508 581 ntBASIC8.8□□□□□ -1
TOP2AP11388 RPL19P16-201ENST00000433839 588 ntBASIC8.8□□□□□ -1
TOP2AP11388 AC046176.1-201ENST00000435260 1170 ntBASIC8.8□□□□□ -1
TOP2AP11388 OR1H1P-201ENST00000448731 937 ntBASIC8.8□□□□□ -1
TOP2AP11388 snoU13.29-201ENST00000459370 104 ntBASIC8.8□□□□□ -1
TOP2AP11388 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC8.8□□□□□ -1
TOP2AP11388 RN7SKP122-201ENST00000515923 296 ntBASIC8.8□□□□□ -1
TOP2AP11388 RN7SKP276-201ENST00000516242 268 ntBASIC8.8□□□□□ -1
TOP2AP11388 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC8.8□□□□□ -1
TOP2AP11388 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC8.8□□□□□ -1
TOP2AP11388 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC8.8□□□□□ -1
TOP2AP11388 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC8.79□□□□□ -1
TOP2AP11388 AC004076.2-201ENST00000620532 3323 ntBASIC8.79□□□□□ -1
TOP2AP11388 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
TOP2AP11388 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC8.79□□□□□ -1
TOP2AP11388 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.79□□□□□ -1
TOP2AP11388 LARS-201ENST00000274562 2213 ntTSL 2 BASIC8.79□□□□□ -1
TOP2AP11388 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
TOP2AP11388 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC8.79□□□□□ -1
TOP2AP11388 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC8.79□□□□□ -1
TOP2AP11388 RSL24D1P6-201ENST00000426934 401 ntBASIC8.79□□□□□ -1
TOP2AP11388 OR2B7P-201ENST00000429302 934 ntBASIC8.79□□□□□ -1
TOP2AP11388 AC068287.1-201ENST00000430283 295 ntBASIC8.79□□□□□ -1
TOP2AP11388 CCNB1IP1P2-201ENST00000432876 818 ntBASIC8.79□□□□□ -1
TOP2AP11388 AC016772.1-201ENST00000444170 1261 ntBASIC8.79□□□□□ -1
TOP2AP11388 BX842559.2-201ENST00000451418 605 ntBASIC8.79□□□□□ -1
TOP2AP11388 SSR3-206ENST00000476217 807 ntTSL 3 BASIC8.79□□□□□ -1
TOP2AP11388 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC8.79□□□□□ -1
TOP2AP11388 IGBP1P5-201ENST00000507524 1000 ntBASIC8.79□□□□□ -1
TOP2AP11388 ENPP7P9-201ENST00000514456 627 ntBASIC8.79□□□□□ -1
TOP2AP11388 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC8.79□□□□□ -1
TOP2AP11388 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC8.79□□□□□ -1
TOP2AP11388 MIR4284-201ENST00000578924 81 ntBASIC8.79□□□□□ -1
TOP2AP11388 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC8.79□□□□□ -1
TOP2AP11388 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
TOP2AP11388 KARSP3-201ENST00000571212 1504 ntBASIC8.79□□□□□ -1
TOP2AP11388 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
TOP2AP11388 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
TOP2AP11388 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC8.78□□□□□ -1
TOP2AP11388 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC8.78□□□□□ -1
TOP2AP11388 RNA5SP223-201ENST00000365174 120 ntBASIC8.78□□□□□ -1
TOP2AP11388 RNA5SP345-201ENST00000410646 108 ntBASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms