Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 AC005332.5-201ENST00000591222 2919 ntBASIC5.8□□□□□ -1.48
CCDC172P0C7W6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 RNA5SP122-201ENST00000384457 108 ntBASIC5.8□□□□□ -1.48
CCDC172P0C7W6 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 OR7E156P-201ENST00000400303 464 ntBASIC5.8□□□□□ -1.48
CCDC172P0C7W6 AL359643.1-201ENST00000404109 423 ntBASIC5.8□□□□□ -1.48
CCDC172P0C7W6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 BMS1P17-202ENST00000416720 316 ntBASIC5.8□□□□□ -1.48
CCDC172P0C7W6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 AC124944.2-201ENST00000429866 1242 ntBASIC5.8□□□□□ -1.48
CCDC172P0C7W6 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 OR8G3P-201ENST00000533406 921 ntBASIC5.8□□□□□ -1.48
CCDC172P0C7W6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 AC060766.1-201ENST00000590824 627 ntBASIC5.8□□□□□ -1.48
CCDC172P0C7W6 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.8□□□□□ -1.48
CCDC172P0C7W6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 RN7SKP240-201ENST00000410583 375 ntBASIC5.79□□□□□ -1.48
CCDC172P0C7W6 SDHDP6-201ENST00000414693 480 ntBASIC5.79□□□□□ -1.48
CCDC172P0C7W6 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 DNAJB5P1-201ENST00000454004 806 ntBASIC5.79□□□□□ -1.48
CCDC172P0C7W6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 IMPA1P1-201ENST00000510718 842 ntBASIC5.79□□□□□ -1.48
CCDC172P0C7W6 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 AC092709.1-201ENST00000521355 1045 ntBASIC5.79□□□□□ -1.48
CCDC172P0C7W6 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 AC127024.5-201ENST00000580085 462 ntBASIC5.79□□□□□ -1.48
CCDC172P0C7W6 AC134669.1-201ENST00000581275 672 ntBASIC5.79□□□□□ -1.48
CCDC172P0C7W6 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 AL133406.3-201ENST00000606817 541 ntBASIC5.79□□□□□ -1.48
CCDC172P0C7W6 AL118522.2-201ENST00000616045 615 ntBASIC5.79□□□□□ -1.48
CCDC172P0C7W6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC172P0C7W6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 OR9G4-201ENST00000302957 984 ntBASIC5.78□□□□□ -1.48
CCDC172P0C7W6 OR9K1P-201ENST00000326513 941 ntBASIC5.78□□□□□ -1.48
CCDC172P0C7W6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 AL672167.2-201ENST00000377164 879 ntBASIC5.78□□□□□ -1.48
CCDC172P0C7W6 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 SEPT7P2-202ENST00000398921 823 ntBASIC5.78□□□□□ -1.48
CCDC172P0C7W6 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 TNPO1P1-201ENST00000423641 1138 ntBASIC5.78□□□□□ -1.48
CCDC172P0C7W6 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 ARAFP2-201ENST00000440565 559 ntBASIC5.78□□□□□ -1.48
CCDC172P0C7W6 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 EEF1B2P6-201ENST00000445713 673 ntBASIC5.78□□□□□ -1.48
CCDC172P0C7W6 AC105399.1-202ENST00000447303 205 ntBASIC5.78□□□□□ -1.48
CCDC172P0C7W6 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 AC079168.1-201ENST00000458741 345 ntBASIC5.78□□□□□ -1.48
CCDC172P0C7W6 PFN1P8-201ENST00000497012 543 ntBASIC5.78□□□□□ -1.48
CCDC172P0C7W6 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC172P0C7W6 EIF3KP3-201ENST00000514461 639 ntBASIC5.78□□□□□ -1.48
CCDC172P0C7W6 AC078878.1-201ENST00000539832 958 ntBASIC5.78□□□□□ -1.48
CCDC172P0C7W6 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms