Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4□□□□□ -1.77
CXCL1P09341 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CXCL1P09341 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CXCL1P09341 RNA5SP223-201ENST00000365174 120 ntBASIC4□□□□□ -1.77
CXCL1P09341 MIR589-201ENST00000385238 99 ntBASIC4□□□□□ -1.77
CXCL1P09341 AL139039.2-201ENST00000407436 479 ntBASIC4□□□□□ -1.77
CXCL1P09341 AL354890.1-201ENST00000413730 346 ntBASIC4□□□□□ -1.77
CXCL1P09341 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4□□□□□ -1.77
CXCL1P09341 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4□□□□□ -1.77
CXCL1P09341 OR2X1P-201ENST00000421144 687 ntBASIC4□□□□□ -1.77
CXCL1P09341 UBQLN1P1-207ENST00000441056 1169 ntBASIC4□□□□□ -1.77
CXCL1P09341 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4□□□□□ -1.77
CXCL1P09341 RHEBP2-201ENST00000450289 600 ntBASIC4□□□□□ -1.77
CXCL1P09341 AC023194.2-201ENST00000465398 406 ntBASIC4□□□□□ -1.77
CXCL1P09341 RPSAP37-201ENST00000470913 821 ntBASIC4□□□□□ -1.77
CXCL1P09341 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4□□□□□ -1.77
CXCL1P09341 AC091874.2-201ENST00000505889 720 ntBASIC4□□□□□ -1.77
CXCL1P09341 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4□□□□□ -1.77
CXCL1P09341 GUSBP9-201ENST00000510138 584 ntBASIC4□□□□□ -1.77
CXCL1P09341 AC109464.1-201ENST00000511091 819 ntBASIC4□□□□□ -1.77
CXCL1P09341 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4□□□□□ -1.77
CXCL1P09341 RPL23AP53-201ENST00000521854 457 ntBASIC4□□□□□ -1.77
CXCL1P09341 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC4□□□□□ -1.77
CXCL1P09341 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC4□□□□□ -1.77
CXCL1P09341 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4□□□□□ -1.77
CXCL1P09341 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4□□□□□ -1.77
CXCL1P09341 GSTP1P1-201ENST00000548078 319 ntBASIC4□□□□□ -1.77
CXCL1P09341 CYCSP40-201ENST00000575927 294 ntBASIC4□□□□□ -1.77
CXCL1P09341 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4□□□□□ -1.77
CXCL1P09341 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4□□□□□ -1.77
CXCL1P09341 OR14L1P-202ENST00000641545 3009 ntBASIC4□□□□□ -1.77
CXCL1P09341 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CXCL1P09341 IFIT1P1-201ENST00000400497 1449 ntBASIC4□□□□□ -1.77
CXCL1P09341 AC017104.4-201ENST00000636283 1592 ntBASIC4□□□□□ -1.77
CXCL1P09341 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CXCL1P09341 AC092435.4-201ENST00000623012 4159 ntBASIC4□□□□□ -1.77
CXCL1P09341 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4□□□□□ -1.77
CXCL1P09341 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4□□□□□ -1.77
CXCL1P09341 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CXCL1P09341 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
CXCL1P09341 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CXCL1P09341 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL1P09341 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL1P09341 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL1P09341 AC091046.3-201ENST00000631455 1574 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL1P09341 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL1P09341 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CXCL1P09341 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CXCL1P09341 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CXCL1P09341 RNU1-65P-201ENST00000363919 148 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL1P09341 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL1P09341 OR7E101P-201ENST00000400428 513 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 AL035079.1-201ENST00000405210 287 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 NFU1P1-201ENST00000413128 774 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 AC009237.10-201ENST00000414112 510 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL1P09341 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL1P09341 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL1P09341 RPSAP32-201ENST00000432681 526 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CXCL1P09341 GAPDHP58-201ENST00000438477 1006 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC3.99□□□□□ -1.77
CXCL1P09341 AL356121.1-201ENST00000442911 156 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 Z80107.2-201ENST00000445127 392 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL1P09341 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL1P09341 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL1P09341 AC079168.1-201ENST00000458741 345 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL1P09341 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL1P09341 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL1P09341 RN7SL817P-201ENST00000480777 288 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 NIP7P2-201ENST00000485801 544 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL1P09341 RNU2-45P-201ENST00000516068 187 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 RN7SKP35-201ENST00000517210 151 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 AC021733.2-201ENST00000518830 497 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL1P09341 IGLV3-30-201ENST00000524362 298 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC3.99□□□□□ -1.77
CXCL1P09341 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC3.99□□□□□ -1.77
CXCL1P09341 AP005403.1-201ENST00000579720 229 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 APOC2-205ENST00000592257 444 ntTSL 3 BASIC3.99□□□□□ -1.77
CXCL1P09341 AC009027.1-201ENST00000604510 479 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 AP001437.1-201ENST00000608783 456 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 AL158196.1-201ENST00000616786 434 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 MIR6823-201ENST00000622118 61 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CXCL1P09341 AL390318.1-201ENST00000624564 687 ntBASIC3.99□□□□□ -1.77
CXCL1P09341 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC3.99□□□□□ -1.77
CXCL1P09341 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CXCL1P09341 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL1P09341 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.99□□□□□ -1.77
CXCL1P09341 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.99□□□□□ -1.77
CXCL1P09341 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CXCL1P09341 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CXCL1P09341 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms