Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.15□□□□□ -1.9
PKHD1P08F94 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.15□□□□□ -1.9
PKHD1P08F94 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PKHD1P08F94 TAF1L-201ENST00000242310 6216 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
PKHD1P08F94 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC3.15□□□□□ -1.9
PKHD1P08F94 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PKHD1P08F94 STK3-216ENST00000523601 3107 ntTSL 2 BASIC3.15□□□□□ -1.9
PKHD1P08F94 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
PKHD1P08F94 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PKHD1P08F94 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
PKHD1P08F94 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC3.15□□□□□ -1.9
PKHD1P08F94 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
PKHD1P08F94 ERG-210ENST00000442448 5034 ntTSL 5 BASIC3.15□□□□□ -1.9
PKHD1P08F94 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PKHD1P08F94 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PKHD1P08F94 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PKHD1P08F94 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
PKHD1P08F94 RNU1-59P-201ENST00000364829 162 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 SNORA66-201ENST00000384792 133 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 PPIAP9-201ENST00000403866 498 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 OR8G2P-201ENST00000412796 908 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 AL139095.3-201ENST00000419672 1203 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 AC091390.3-201ENST00000426478 338 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.15□□□□□ -1.91
PKHD1P08F94 ACTR3P2-201ENST00000439585 1257 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 IGHV5-78-201ENST00000450948 295 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 RPL7L1P8-201ENST00000469911 741 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.15□□□□□ -1.91
PKHD1P08F94 GLUD1P3-202ENST00000508551 200 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.15□□□□□ -1.91
PKHD1P08F94 HNRNPRP2-201ENST00000528421 743 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.15□□□□□ -1.91
PKHD1P08F94 AC019322.1-201ENST00000571869 389 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 AC008739.3-201ENST00000603262 127 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 U1.25-201ENST00000614085 162 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 U1.34-201ENST00000618578 162 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 U1.31-201ENST00000620022 160 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PKHD1P08F94 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
PKHD1P08F94 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.15□□□□□ -1.91
PKHD1P08F94 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC3.15□□□□□ -1.91
PKHD1P08F94 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC3.15□□□□□ -1.91
PKHD1P08F94 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PKHD1P08F94 OR8V1P-201ENST00000395193 873 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 AL161909.1-201ENST00000397390 712 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 OR7E125P-201ENST00000443450 846 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 snoU13.24-201ENST00000458998 104 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 AK3P4-201ENST00000504283 583 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 FTH1P21-201ENST00000512179 511 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 PMS2P3-207ENST00000529061 717 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 OR8R1P-201ENST00000543943 764 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
PKHD1P08F94 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC3.15□□□□□ -1.91
PKHD1P08F94 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC3.15□□□□□ -1.91
PKHD1P08F94 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 AL627171.1-201ENST00000618845 1308 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC3.15□□□□□ -1.91
PKHD1P08F94 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PKHD1P08F94 AP001029.2-203ENST00000589795 4910 ntBASIC3.15□□□□□ -1.91
PKHD1P08F94 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC3.15□□□□□ -1.91
PKHD1P08F94 ATP5A1P4-201ENST00000556888 1605 ntBASIC3.14□□□□□ -1.91
PKHD1P08F94 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
PKHD1P08F94 RNA5SP509-201ENST00000364577 119 ntBASIC3.14□□□□□ -1.91
PKHD1P08F94 MIR659-201ENST00000384963 97 ntBASIC3.14□□□□□ -1.91
PKHD1P08F94 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC3.14□□□□□ -1.91
PKHD1P08F94 HYALP1-201ENST00000417674 1279 ntBASIC3.14□□□□□ -1.91
PKHD1P08F94 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC3.14□□□□□ -1.91
PKHD1P08F94 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.14□□□□□ -1.91
PKHD1P08F94 AC091959.2-201ENST00000477363 321 ntBASIC3.14□□□□□ -1.91
PKHD1P08F94 RN7SL441P-201ENST00000492388 296 ntBASIC3.14□□□□□ -1.91
PKHD1P08F94 AL133372.1-201ENST00000493565 745 ntBASIC3.14□□□□□ -1.91
PKHD1P08F94 RNU2-30P-201ENST00000516209 141 ntBASIC3.14□□□□□ -1.91
PKHD1P08F94 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC3.14□□□□□ -1.91
PKHD1P08F94 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PKHD1P08F94 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC3.14□□□□□ -1.91
PKHD1P08F94 H3F3BP2-201ENST00000583907 357 ntBASIC3.14□□□□□ -1.91
PKHD1P08F94 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.14□□□□□ -1.91
PKHD1P08F94 AC074101.1-201ENST00000637861 241 ntBASIC3.14□□□□□ -1.91
PKHD1P08F94 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PKHD1P08F94 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PKHD1P08F94 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC3.14□□□□□ -1.91
PKHD1P08F94 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
PKHD1P08F94 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PKHD1P08F94 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PKHD1P08F94 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC3.14□□□□□ -1.91
PKHD1P08F94 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PKHD1P08F94 SHTN1-207ENST00000615301 6730 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
PKHD1P08F94 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms