Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC005229.3-201ENST00000603438 323 ntBASIC4.86□□□□□ -1.63
SFTPBP07988 KATNBL1P1-201ENST00000605192 748 ntBASIC4.86□□□□□ -1.63
SFTPBP07988 AC009032.1-201ENST00000617574 431 ntBASIC4.86□□□□□ -1.63
SFTPBP07988 AC021106.3-201ENST00000623925 531 ntBASIC4.86□□□□□ -1.63
SFTPBP07988 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SFTPBP07988 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SFTPBP07988 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.86□□□□□ -1.63
SFTPBP07988 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SFTPBP07988 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.86□□□□□ -1.63
SFTPBP07988 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.86□□□□□ -1.63
SFTPBP07988 MTCO1P11-201ENST00000429111 1528 ntBASIC4.86□□□□□ -1.63
SFTPBP07988 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SFTPBP07988 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SFTPBP07988 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.86□□□□□ -1.63
SFTPBP07988 AC002525.1-201ENST00000624392 1622 ntBASIC4.86□□□□□ -1.63
SFTPBP07988 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SFTPBP07988 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SFTPBP07988 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.86□□□□□ -1.63
SFTPBP07988 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.85□□□□□ -1.63
SFTPBP07988 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SFTPBP07988 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SFTPBP07988 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SFTPBP07988 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.85□□□□□ -1.63
SFTPBP07988 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.85□□□□□ -1.63
SFTPBP07988 TMSB4XP4-201ENST00000323496 618 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 RNA5SP500-201ENST00000364486 119 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 SNORA11B-201ENST00000408175 129 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 AC096921.1-201ENST00000411661 375 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.85□□□□□ -1.63
SFTPBP07988 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.85□□□□□ -1.63
SFTPBP07988 NIFKP3-201ENST00000417799 865 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 OR51A6P-201ENST00000418680 1004 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 NENFP1-201ENST00000419476 466 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.85□□□□□ -1.63
SFTPBP07988 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.85□□□□□ -1.63
SFTPBP07988 OR10T1P-201ENST00000424327 947 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 RPL23AP4-201ENST00000427757 463 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.85□□□□□ -1.63
SFTPBP07988 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.85□□□□□ -1.63
SFTPBP07988 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.85□□□□□ -1.63
SFTPBP07988 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.85□□□□□ -1.63
SFTPBP07988 RPL36AP39-201ENST00000445859 318 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.85□□□□□ -1.63
SFTPBP07988 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SFTPBP07988 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.85□□□□□ -1.63
SFTPBP07988 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.85□□□□□ -1.63
SFTPBP07988 RPS23P2-201ENST00000463671 415 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SFTPBP07988 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.85□□□□□ -1.63
SFTPBP07988 PPIAP19-201ENST00000486414 492 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.85□□□□□ -1.63
SFTPBP07988 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.85□□□□□ -1.63
SFTPBP07988 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.85□□□□□ -1.63
SFTPBP07988 ACTR6P1-201ENST00000514311 1104 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.85□□□□□ -1.63
SFTPBP07988 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.85□□□□□ -1.63
SFTPBP07988 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.85□□□□□ -1.63
SFTPBP07988 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.85□□□□□ -1.63
SFTPBP07988 DHFRP1-201ENST00000579682 559 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.85□□□□□ -1.63
SFTPBP07988 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.85□□□□□ -1.63
SFTPBP07988 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SFTPBP07988 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SFTPBP07988 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.85□□□□□ -1.63
SFTPBP07988 MTCO2P22-201ENST00000603246 681 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 MIR6133-201ENST00000617057 108 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.85□□□□□ -1.63
SFTPBP07988 AC103703.1-201ENST00000634783 663 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.85□□□□□ -1.63
SFTPBP07988 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.85□□□□□ -1.63
SFTPBP07988 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.85□□□□□ -1.63
SFTPBP07988 PDZK1P1-202ENST00000425209 1350 ntBASIC4.85□□□□□ -1.63
SFTPBP07988 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SFTPBP07988 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SFTPBP07988 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SFTPBP07988 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.85□□□□□ -1.63
SFTPBP07988 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SFTPBP07988 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
SFTPBP07988 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SFTPBP07988 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SFTPBP07988 AC009962.1-201ENST00000567327 3813 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SFTPBP07988 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.84□□□□□ -1.63
SFTPBP07988 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
SFTPBP07988 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.84□□□□□ -1.63
SFTPBP07988 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SFTPBP07988 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SFTPBP07988 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SFTPBP07988 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.84□□□□□ -1.63
SFTPBP07988 AL606537.1-201ENST00000607258 2011 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SFTPBP07988 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.84□□□□□ -1.63
SFTPBP07988 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SFTPBP07988 AC106872.5-201ENST00000508856 1416 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 HSPA8P17-201ENST00000427029 1382 ntBASIC4.84□□□□□ -1.63
SFTPBP07988 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SFTPBP07988 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.84□□□□□ -1.63
SFTPBP07988 RNA5SP326-201ENST00000363209 110 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms