Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOAP06340 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOAP06340 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOAP06340 MIR133B-201ENST00000362210 119 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 SNORA27.3-201ENST00000364937 134 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 MTND4P13-201ENST00000402078 1023 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 PRUNEP1-201ENST00000425846 705 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC108729.2-201ENST00000476543 840 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC072052.1-201ENST00000496556 306 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC021146.5-201ENST00000503544 545 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 MTND6P2-201ENST00000512226 524 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 HMGB1P40-201ENST00000525121 540 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOAP06340 LRRC34P1-201ENST00000542742 915 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC093510.2-201ENST00000562820 896 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC025811.1-201ENST00000604312 472 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC022079.1-201ENST00000621546 602 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 LINC00216-201ENST00000623548 1126 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC120349.3-201ENST00000624377 529 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC119674.1-220ENST00000641502 1048 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 AC007938.2-201ENST00000604666 2634 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.52□□□□□ -1.37
HLA-DOAP06340 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOAP06340 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HLA-DOAP06340 MRRFP1-201ENST00000435941 1675 ntBASIC6.52□□□□□ -1.37
HLA-DOAP06340 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 AC018765.1-201ENST00000623357 3446 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 SEPT7P7-201ENST00000420492 1301 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 AC011933.2-201ENST00000578539 2790 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 TRAV35-201ENST00000390462 330 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 RNA5SP339-201ENST00000390987 122 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 ANAPC10P1-201ENST00000395991 556 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 CCNB2P1-201ENST00000399411 1150 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 AL356057.1-202ENST00000402263 756 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 THAP12P8-201ENST00000447914 2115 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 FAR2P1-206ENST00000449736 709 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 AURKAPS1-201ENST00000451805 1212 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 AC005532.2-201ENST00000467154 373 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 YWHAZP1-201ENST00000556286 722 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 NPM1P42-201ENST00000560329 862 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 AC040904.1-201ENST00000590850 223 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 FAM60CP-201ENST00000591086 664 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 AC023762.1-201ENST00000603280 584 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 AC016590.3-201ENST00000611171 753 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 AL121612.2-201ENST00000612261 482 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 AC005156.1-201ENST00000613371 573 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 AC026367.3-201ENST00000619032 590 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 AC074101.1-201ENST00000637861 241 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 AC013437.2-201ENST00000639587 677 ntBASIC6.51□□□□□ -1.37
HLA-DOAP06340 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HLA-DOAP06340 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HLA-DOAP06340 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms